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AT2G33340.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : MOS4-associated complex 3B
Curator
Summary (TAIR10)
Encodes MAC3B, a U-box proteins with homology to the yeast and human E3 ubiquitin ligase Prp19. Associated with the MOS4-Associated Complex (MAC). Involved in plant innate immunity.
Computational
Description (TAIR10)
MOS4-associated complex 3B (MAC3B); FUNCTIONS IN: ubiquitin-protein ligase activity, nucleotide binding; INVOLVED IN: defense response to bacterium; LOCATED IN: cell wall, chloroplast, CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), U box domain (InterPro:IPR003613), WD40 repeat (InterPro:IPR001680), Pre-mRNA-splicing factor 19 (InterPro:IPR013915), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: MOS4-associated complex 3A (TAIR:AT1G04510.1); Has 62315 Blast hits to 29584 proteins in 885 species: Archae - 64; Bacteria - 8492; Metazoa - 24454; Fungi - 13690; Plants - 7490; Viruses - 0; Other Eukaryotes - 8125 (source: NCBI BLink).
Protein Annotations
BioGrid:3244EC:6.3.2.-eggNOG:ENOG410XPQVeggNOG:KOG0289EMBL:AC002332EMBL:AY080868EMBL:CP002685
EMBL:FJ820118EnsemblPlants:AT2G33340EnsemblPlants:AT2G33340.1EnsemblPlants:AT2G33340.2entrez:817897ExpressionAtlas:O22785Gene3D:2.130.10.10
Gene3D:3.30.40.10GeneID:817897Genevisible:O22785GO:GO:0005618GO:GO:0005634GO:GO:0005681GO:GO:0006281
GO:GO:0006397GO:GO:0008380GO:GO:0009507GO:GO:0016874GO:GO:0042742GO:GO:0045087GO:GO:0061630
GO:GO:0070534GO:GO:0080008hmmpanther:PTHR22840HOGENOM:HOG000177308InParanoid:O22785IntAct:O22785InterPro:IPR001680
InterPro:IPR003613InterPro:IPR013083InterPro:IPR013915InterPro:IPR015943InterPro:IPR017986iPTMnet:O22785ncoils:Coil
OMA:NCIHTLKPaxDb:O22785Pfam:O22785Pfam:PF00400Pfam:PF08606Pfscan:PS50082Pfscan:PS50294
Pfscan:PS51698PhylomeDB:O22785PIR:C84744PRIDE:O22785PRO:PR:O22785PROSITE:PS50082PROSITE:PS50294
PROSITE:PS51698ProteinModelPortal:O22785Proteomes:UP000006548Reactome:R-ATH-6781823Reactome:R-ATH-6782135Reactome:R-ATH-6782210Reactome:R-ATH-72163
RefSeq:NP_850206.4RefSeq:NP_850207.4SMART:SM00320SMART:SM00504SMR:O22785STRING:3702.AT2G33340.1SUPFAM:SSF50978
SUPFAM:SSF57850TAIR:AT2G33340tair10-symbols:MAC3BUniGene:At.44022UniPathway:UPA00143UniProt:O22785
Coordinates (TAIR10) chr2:-:14126584..14131000
Molecular Weight (calculated) 56730.90 Da
IEP (calculated) 6.03
GRAVY (calculated) -0.23
Length 525 amino acids
Sequence (TAIR10)
(BLAST)
001: MNCAISGEVP VEPVVSTKSG LLFERRLIER HISDYGKCPV TGEPLTIDDI VPIKTGEIIK PKTLHTASIP GLLGTFQNEW DGLMLSNFAL EQQLHTARQE
101: LSHALYQHDS ACRVIARLKK ERDEARQLLA EVERHIPAAP EAVTANAALS NGKRAAVDEE LGPDAKKLCP GISAEIITEL TDCNAALSQK RKKRQIPQTL
201: ASIDTLERFT QLSSHPLHKT NKPGICSMDI LHSKDVIATG GVDATAVLFD RPSGQILSTL TGHSKKVTSV KFVGDSDLVL TASADKTVRI WRNPGDGNYA
301: CGYTLNDHSA EVRAVTVHPT NKYFVSASLD GTWCFYDLSS GSCLAQVSDD SKNVDYTAAA FHPDGLILGT GTSQSVVKIW DVKSQANVAK FDGHTGEVTA
401: ISFSENGYFL ATAAEDGVRL WDLRKLRNFK SFLSADANSV EFDPSGSYLG IAASDIKVYQ TASVKAEWNL IKTLPDLSGT GKATCVKFGS DAQYVAVGSM
501: DRNLRIFGLP GDEKANVDDD SAQDS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)