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AT2G33270.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 1.000
ASURE: plastid
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : atypical CYS HIS rich thioredoxin 3
Curator
Summary (TAIR10)
Encodes a member of the thioredoxin family protein. Located in the chloroplast.
Computational
Description (TAIR10)
atypical CYS HIS rich thioredoxin 3 (ACHT3); FUNCTIONS IN: protein binding; INVOLVED IN: cell redox homeostasis; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: atypical CYS HIS rich thioredoxin 4 (TAIR:AT1G08570.2); Has 2991 Blast hits to 2904 proteins in 568 species: Archae - 19; Bacteria - 487; Metazoa - 929; Fungi - 413; Plants - 623; Viruses - 3; Other Eukaryotes - 517 (source: NCBI BLink).
Protein Annotations
BioGrid:3237eggNOG:COG0526eggNOG:KOG0907EMBL:AC002332EMBL:CP002685EMBL:DQ056563EnsemblPlants:AT2G33270
EnsemblPlants:AT2G33270.1entrez:817890Gene3D:3.40.30.10GeneID:817890Genevisible:O22779GO:GO:0000103GO:GO:0006457
GO:GO:0006662GO:GO:0009507GO:GO:0015035GO:GO:0016671GO:GO:0034599GO:GO:0045454GO:GO:0055114
Gramene:AT2G33270.1hmmpanther:PTHR10438hmmpanther:PTHR10438:SF245HOGENOM:HOG000154691InParanoid:O22779IntAct:O22779InterPro:IPR005746
InterPro:IPR012336InterPro:IPR013766KEGG:ath:AT2G33270OMA:REQCSIGPANTHER:PTHR10438PaxDb:O22779Pfam:O22779
Pfam:PF00085Pfscan:PS51352PhylomeDB:O22779PIR:D84743PRIDE:O22779PRO:PR:O22779PROSITE:PS51352
ProteinModelPortal:O22779Proteomes:UP000006548RefSeq:NP_180885.1SMR:O22779STRING:3702.AT2G33270.1SUPFAM:SSF52833TAIR:AT2G33270
tair10-symbols:ACHT3UniGene:At.53018UniProt:O22779
Coordinates (TAIR10) chr2:+:14103681..14105204
Molecular Weight (calculated) 30681.10 Da
IEP (calculated) 9.55
GRAVY (calculated) -0.35
Length 273 amino acids
Sequence (TAIR10)
(BLAST)
001: MATDSFIKLN PISFNRARFD LRDFAGISPK SISSLCCISP RLISCNHFSP RTLISGENGN ILFSKKKIPA FVRCQTSLGI GRNQKWWEKE LKPNMKSVTS
101: PQDLVVSLRN AGDKLVVVDF FSPSCGGCKA LHPKICKIAE KNPEVEFLQV NYEEHRSLCQ SLNIHVLPFF RFYRGSSGRV CSFSCTNATI RKFKEALEKH
201: GREQCSIGET KGLEEKELVA MAANKDLSFD YKPTSCGNIQ EQKKKEIFLP KSPTFNKQKE VEHSLLLVSP APA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)