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AT2G33260.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 0.774
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Tryptophan/tyrosine permease
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Tryptophan/tyrosine permease; CONTAINS InterPro DOMAIN/s: Tryptophan/tyrosine permease (InterPro:IPR018227); BEST Arabidopsis thaliana protein match is: Tryptophan/tyrosine permease (TAIR:AT5G19500.1); Has 2832 Blast hits to 2825 proteins in 686 species: Archae - 20; Bacteria - 2600; Metazoa - 3; Fungi - 2; Plants - 103; Viruses - 0; Other Eukaryotes - 104 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0814eggNOG:ENOG410IE7XEMBL:AC002332EMBL:CP002685EMBL:DQ056562EnsemblPlants:AT2G33260EnsemblPlants:AT2G33260.1
entrez:817889GeneID:817889GO:GO:0003333GO:GO:0016021Gramene:AT2G33260.1hmmpanther:PTHR32195hmmpanther:PTHR32195:SF12
HOGENOM:HOG000070601InterPro:IPR018227KEGG:ath:AT2G33260OMA:FICKIAGPfam:PF03222PhylomeDB:O22778PIR:C84743
Proteomes:UP000006548RefSeq:NP_180884.1STRING:3702.AT2G33260.1TAIR:AT2G33260TMHMM:TMhelixUniGene:At.53017UniProt:O22778
Coordinates (TAIR10) chr2:-:14100840..14102252
Molecular Weight (calculated) 46410.30 Da
IEP (calculated) 9.47
GRAVY (calculated) 0.77
Length 436 amino acids
Sequence (TAIR10)
(BLAST)
001: MDDLEITHET KKGKSFWAAV SLIIGTAVGP GMLGLPAATI RSGSIPSTIA LLCSWVYVIS SILLVAELSF AAMEEDNAAE VSFTGLATKS FGNKFGVFVA
101: FVYASLSFSL MVACVSGIGS IVSQWFPSMN PFLANAIFPL VSGILIGFFP FNAIDFTNRG LCFLMLFSIT SLVAIGLSVA RSNVLASFGQ SCWKVSMVLP
201: AVPVMVLTLG FHVITPFICN LAGDSVSDAR RAILVGGVVP LAMVLSWNLI VLGLARITVP AAPSSTIDPI SLLLSVNPSA LSAVQGFAFS ALATSLIGYA
301: VSFPKQLLDT WKLVSKQSNG NGRLGSVSFS SKERDRRTNG RASYNEPARA RDGFEAVVML FVLGVPALIA TFFPSTFSRA LDFAGVYANC FLFGVLPPAM
401: AYIQQSRKKL RPWVLPGGNF TLLILFAIAI ILGIWH
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)