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AT2G33220.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : GRIM-19 protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
GRIM-19 protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photorespiration; LOCATED IN: mitochondrion, mitochondrial membrane, mitochondrial respiratory chain complex I, respiratory chain complex I; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: GRIM-19 (InterPro:IPR009346); BEST Arabidopsis thaliana protein match is: GRIM-19 protein (TAIR:AT1G04630.1); Has 333 Blast hits to 333 proteins in 145 species: Archae - 0; Bacteria - 0; Metazoa - 161; Fungi - 83; Plants - 67; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G33220-MONOMERBioCyc:MetaCyc:AT2G33220-MONOMERBioGrid:3231eggNOG:ENOG4111KIB
eggNOG:KOG3300EMBL:AC002334EMBL:AY065249EMBL:AY088795
EMBL:AY091317EMBL:CP002685EnsemblPlants:AT2G33220EnsemblPlants:AT2G33220.1
entrez:817884GeneID:817884Genevisible:O49313GO:GO:0005739
GO:GO:0005747GO:GO:0009853GO:GO:0016021GO:GO:0031966
GO:GO:0045271GO:GO:0055114Gramene:AT2G33220.1hmmpanther:PTHR12966
hmmpanther:PTHR12966:SF0HOGENOM:HOG000195836InParanoid:O49313IntAct:O49313
InterPro:IPR009346KEGG:ath:AT2G33220KO:K11353OMA:AWVRNKP
PANTHER:PTHR12966PaxDb:O49313Pfam:O49313Pfam:PF06212
PhylomeDB:O49313PIR:G84742PRIDE:O49313PRO:PR:O49313
Proteomes:UP000006548RefSeq:NP_565761.1STRING:3702.AT2G33220.1TAIR:AT2G33220
TMHMM:TMhelixUniGene:At.20804UniGene:At.34567UniProt:O49313
Coordinates (TAIR10) chr2:+:14078974..14079929
Molecular Weight (calculated) 16122.50 Da
IEP (calculated) 9.82
GRAVY (calculated) -0.47
Length 143 amino acids
Sequence (TAIR10)
(BLAST)
001: MTEAMIRKKP GMASVKDMPL LQDGPPPGGF APVRYARRIS NTGPSAMAIF LTVSGAFAWG MYQVGQGNKI RRALKEEKYA ARRAILPILQ AEEDERFVSE
101: WKKYLEYEAD VMKDVPGWKV GENVYNSGRW MPPATGELRP DVW
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)