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AT2G33150.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
peroxisome 1.000
ASURE: peroxisome
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:27943495 (2017): mitochondrion
  • PMID:26781341 (2016): plasma membrane
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:25900983 (2015): plant-type vacuole plant-type vacuole membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25900983 (2015): Golgi trans-Golgi network early endosome
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:25641898 (2015): plasma membrane
  • PMID:24134884 (2013): cytoskeleton microtubules
  • PMID:24130194 (2013): peroxisome
  • PMID:23396599 (2013): nucleus nuclear envelope nuclear inner membrane
  • PMID:21841088 (2011): mitochondrion
  • PMID:21472856 (2011): mitochondrion
  • PMID:19334764 (2009): plasma membrane
  • PMID:19329564 (2009): peroxisome
  • PMID:18931141 (2008): peroxisome
  • PMID:17951448 (2007): peroxisome
  • PMID:17151019 (2007): plant-type vacuole
  • PMID:15496452 (2005): nucleus
  • PMID:15028209 (2004): plastid
  • PMID:14764908 (2004): mitochondrion
  • PMID:14671022 (2004): mitochondrion
  • PMID:11743114 (2001): mitochondrion
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : peroxisomal 3-ketoacyl-CoA thiolase 3
Curator
Summary (TAIR10)
Encodes an organellar (peroxisome, glyoxysome) 3-ketoacyl-CoA thiolase, involved in fatty acid b-oxidation during germination and subsequent seedling growth. Mutants have defects in glyoxysomal fatty acid beta-oxidation. EC2.3.1.16 thiolase.
Computational
Description (TAIR10)
peroxisomal 3-ketoacyl-CoA thiolase 3 (PKT3); FUNCTIONS IN: acetyl-CoA C-acyltransferase activity; INVOLVED IN: fatty acid beta-oxidation, jasmonic acid biosynthetic process, response to wounding, fatty acid oxidation, glyoxysome organization; LOCATED IN: in 6 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase (InterPro:IPR002155), Thiolase, active site (InterPro:IPR020610), Thiolase, N-terminal (InterPro:IPR020616), Thiolase, conserved site (InterPro:IPR020613), Thiolase, C-terminal (InterPro:IPR020617), Thiolase-like, subgroup (InterPro:IPR016038), Thiolase-like (InterPro:IPR016039), Thiolase, acyl-enzyme intermediate active site (InterPro:IPR020615); BEST Arabidopsis thaliana protein match is: peroxisomal 3-ketoacyl-CoA thiolase 4 (TAIR:AT1G04710.1); Has 22382 Blast hits to 22371 proteins in 2261 species: Archae - 414; Bacteria - 14116; Metazoa - 985; Fungi - 655; Plants - 282; Viruses - 0; Other Eukaryotes - 5930 (source: NCBI BLink).
Protein Annotations
BioCyc:MetaCyc:AT2G33150-MONOMERBioGrid:3223BRENDA:2.3.1.16EC:2.3.1.16eggNOG:COG0183eggNOG:KOG1389EMBL:AB008854
EMBL:AB008855EMBL:AC002334EMBL:AF327529EMBL:AF349530EMBL:AK222103EMBL:AY052702EMBL:AY058176
EMBL:AY063720EMBL:AY087543EMBL:CP002685EnsemblPlants:AT2G33150EnsemblPlants:AT2G33150.1entrez:817876EvolutionaryTrace:Q56WD9
Gene3D:3.40.47.10GeneID:817876Genevisible:Q56WD9GO:GO:0003988GO:GO:0005730GO:GO:0005739GO:GO:0005774
GO:GO:0005777GO:GO:0006635GO:GO:0009507GO:GO:0009514GO:GO:0009611GO:GO:0009695GO:GO:0009789
GO:GO:0010111GO:GO:0016020GO:GO:0031408Gramene:AT2G33150.1gramene_pathway:2.3.1.16gramene_pathway:PWY-5136gramene_pathway:PWY-735
hmmpanther:PTHR18919hmmpanther:PTHR18919:SF93HOGENOM:HOG000012239InParanoid:Q56WD9IntAct:Q56WD9InterPro:IPR002155InterPro:IPR016039
InterPro:IPR020610InterPro:IPR020613InterPro:IPR020615InterPro:IPR020616InterPro:IPR020617KEGG:ath:AT2G33150KO:K07513
MINT:MINT-8059930OMA:PQGKEDGPaxDb:Q56WD9PDB:2C7YPDB:2C7ZPDB:2WU9PDBsum:2C7Y
PDBsum:2C7ZPDBsum:2WU9Pfam:PF00108Pfam:PF02803Pfam:Q56WD9PhylomeDB:Q56WD9PIR:T52110
PRIDE:Q56WD9PRO:PR:Q56WD9PROSITE:PS00098PROSITE:PS00099PROSITE:PS00737ProteinModelPortal:Q56WD9Proteomes:UP000006548
Reactome:R-ATH-2046106Reactome:R-ATH-390247RefSeq:NP_180873.1scanprosite:PS00098scanprosite:PS00099scanprosite:PS00737SMR:Q56WD9
STRING:3702.AT2G33150.1SUPFAM:SSF53901TAIR:AT2G33150tair10-symbols:KAT2tair10-symbols:PED1tair10-symbols:PKT3TIGRfam:TIGR01930
TIGRFAMs:TIGR01930UniGene:At.23661UniGene:At.72951UniPathway:UPA00199UniProt:Q56WD9
Coordinates (TAIR10) chr2:-:14047814..14050983
Molecular Weight (calculated) 48581.40 Da
IEP (calculated) 8.47
GRAVY (calculated) -0.05
Length 462 amino acids
Sequence (TAIR10)
(BLAST)
001: MEKAIERQRV LLEHLRPSSS SSHNYEASLS ASACLAGDSA AYQRTSLYGD DVVIVAAHRT PLCKSKRGNF KDTYPDDLLA PVLRALIEKT NLNPSEVGDI
101: VVGTVLAPGS QRASECRMAA FYAGFPETVA VRTVNRQCSS GLQAVADVAA AIKAGFYDIG IGAGLESMTT NPMAWEGSVN PAVKKFAQAQ NCLLPMGVTS
201: ENVAQRFGVS RQEQDQAAVD SHRKAAAATA AGKFKDEIIP VKTKLVDPKT GDEKPITVSV DDGIRPTTTL ASLGKLKPVF KKDGTTTAGN SSQVSDGAGA
301: VLLMKRSVAM QKGLPVLGVF RTFAAVGVDP AIMGIGPAVA IPAAVKAAGL ELDDIDLFEI NEAFASQFVY CRNKLGLDPE KINVNGGAMA IGHPLGATGA
401: RCVATLLHEM KRRGKDCRFG VVSMCIGTGM GAAAVFERGD GVDELRNARK VEAQGLLSKD AR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)