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AT2G33040.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
mitochondrion 1.000
ASURE: mitochondrion
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:23250447 (2012): mitochondrion mitochondrial envelope mitochondrial inner membrane
  • PMID:15610358 (2005): unclear
  • PMID:27943495 (2017): mitochondrion
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:25900983 (2015): plant-type vacuole plant-type vacuole membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:25900983 (2015): Golgi trans-Golgi network early endosome
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25900983 (2015): Golgi
  • PMID:25900983 (2015): Golgi Golgi apparatus Golgi membrane
  • PMID:24872594 (2014): plastid
  • PMID:23549413 (2013): plastid
  • PMID:23444301 (2013): mitochondrion
  • PMID:23323832 (2013): plasma membrane
  • PMID:22923678 (2012): mitochondrion
  • PMID:21896887 (2011): mitochondrion mitochondrial envelope mitochondrial outer membrane
  • PMID:21841088 (2011): mitochondrion
  • PMID:21472856 (2011): mitochondrion
  • PMID:20843791 (2010): plasma membrane
  • PMID:19334764 (2009): plasma membrane
  • PMID:18189341 (2008): mitochondrion
  • PMID:16618929 (2006): unclear
  • PMID:15496452 (2005): nucleus
  • PMID:15276431 (2004): mitochondrion
  • PMID:15028209 (2004): plastid
  • PMID:14671022 (2004): mitochondrion
  • PMID:12681508 (2003): mitochondrion
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : gamma subunit of Mt ATP synthase
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
gamma subunit of Mt ATP synthase (ATP3); FUNCTIONS IN: zinc ion binding; INVOLVED IN: proton transport, ATP synthesis coupled proton transport; LOCATED IN: in 7 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1 complex, gamma subunit (InterPro:IPR000131); BEST Arabidopsis thaliana protein match is: ATPase, F1 complex, gamma subunit protein (TAIR:AT1G15700.1); Has 9548 Blast hits to 9546 proteins in 2754 species: Archae - 5; Bacteria - 5621; Metazoa - 285; Fungi - 151; Plants - 166; Viruses - 0; Other Eukaryotes - 3320 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G33040-MONOMERBioGrid:3213eggNOG:COG0224eggNOG:KOG1531EMBL:AC002334EMBL:AC003033EMBL:AY039513
EMBL:AY062627EMBL:AY086685EMBL:AY102152EMBL:CP002685EMBL:D88374EnsemblPlants:AT2G33040EnsemblPlants:AT2G33040.1
entrez:817866GeneID:817866Genevisible:Q96250GO:GO:0005618GO:GO:0005634GO:GO:0005730GO:GO:0005737
GO:GO:0005739GO:GO:0005753GO:GO:0008270GO:GO:0009507GO:GO:0015986GO:GO:0045261GO:GO:0046933
GO:GO:0046961Gramene:AT2G33040.1HAMAP:MF_00815hmmpanther:PTHR11693hmmpanther:PTHR11693:SF22HOGENOM:HOG000215911InParanoid:Q96250
IntAct:Q96250InterPro:IPR000131InterPro:IPR023632InterPro:IPR023633iPTMnet:Q96250KEGG:ath:AT2G33040KO:K02136
OMA:CGAIHSGPANTHER:PTHR11693PaxDb:Q96250Pfam:PF00231Pfam:Q96250PhylomeDB:Q96250PIR:F84740
PIR:T01103PRIDE:Q96250PRINTS:PR00126PRO:PR:Q96250PROSITE:PS00153ProteinModelPortal:Q96250Proteomes:UP000006548
RefSeq:NP_180863.1scanprosite:PS00153SMR:Q96250STRING:3702.AT2G33040.1SUPFAM:SSF52943SwissPalm:Q96250TAIR:AT2G33040
tair10-symbols:ATP3TIGRfam:TIGR01146TIGRFAMs:TIGR01146UniGene:At.25073UniProt:Q96250
Coordinates (TAIR10) chr2:-:14018978..14021047
Molecular Weight (calculated) 35450.00 Da
IEP (calculated) 9.35
GRAVY (calculated) -0.05
Length 325 amino acids
Sequence (TAIR10)
(BLAST)
001: MAMAVFRREG RRLLPSIAAR PIAAIRSPLS SDQEEGLLGV RSISTQVVRN RMKSVKNIQK ITKAMKMVAA SKLRAVQGRA ENSRGLWQPF TALLGDNPSI
101: DVKKSVVVTL SSDKGLCGGI NSTVVKVSRA LYKLNAGPEK EVQFVIVGEK AKAIMFRDSK NDIVLSVTEL NKNPLNYAQV SVLADDILKN VEFDALRIVY
201: NKFHSVVAFL PTVSTVLSPE IIEKESEIGG KLGELDSYEI EGGETKGEIL QNLAEFQFSC VMFNAVLENA CSEMGARMSA MDSSSRNAGE MLDRLTLTYN
301: RTRQASITTE LIEIISGASA LEAAK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)