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AT2G33020.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 0.945
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding : receptor like protein 24
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
receptor like protein 24 (RLP24); FUNCTIONS IN: kinase activity; INVOLVED IN: signal transduction; LOCATED IN: endomembrane system; EXPRESSED IN: root, cultured cell; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 23 (TAIR:AT2G32680.1); Has 100923 Blast hits to 28307 proteins in 1116 species: Archae - 44; Bacteria - 8298; Metazoa - 20135; Fungi - 1042; Plants - 64031; Viruses - 17; Other Eukaryotes - 7356 (source: NCBI BLink).
Protein Annotations
eggNOG:COG4886eggNOG:KOG0619EMBL:AC002334EMBL:AC003033
EMBL:CP002685EnsemblPlants:AT2G33020EnsemblPlants:AT2G33020.1entrez:817864
Gene3D:3.80.10.10GeneID:817864Gramene:AT2G33020.1hmmpanther:PTHR27004
hmmpanther:PTHR27004:SF37HOGENOM:HOG000116562InterPro:IPR001611InterPro:IPR003591
InterPro:IPR032675KEGG:ath:AT2G33020OMA:PCECEAGPfam:PF13516
Pfam:PF13855PhylomeDB:O49329PIR:D84740PIR:T01105
Proteomes:UP000006548RefSeq:NP_180861.1SMART:SM00369SMR:O49329
STRING:3702.AT2G33020.1SUPFAM:SSF52047TAIR:AT2G33020tair10-symbols:AtRLP24
tair10-symbols:RLP24TMHMM:TMhelixUniGene:At.66296UniProt:O49329
Coordinates (TAIR10) chr2:-:14013874..14016516
Molecular Weight (calculated) 95711.30 Da
IEP (calculated) 6.85
GRAVY (calculated) 0.07
Length 864 amino acids
Sequence (TAIR10)
(BLAST)
001: MKTVFKSLLL LHFLLLLLLC FVSPSSFFLL KVPVGGLVAC RLRQSQAFMQ FKDEFDTRHC NHSDDFNGVW CDNSTGAVTV LQLRDCLSGT LKSNSSLFGF
101: HQLRYLALNR NNFTSASLPS EFCNLNKLKL LSLFSNGFID LSHNDLMGSF PLVRNLGKLA VLDLSDNHFS GTLNPNNSLF ELHSLRYLNL AFNNISSSLP
201: SKFGNLNKLE VLSLSFNGFS GQCFPTISNL TRITQLYLHN NELTGSFPLV QNLTKLSFLG LSDNLFSGTI PSYLFTFPSL STLDLRENDL SGSIEVPNSS
301: TSSKLEIMYL GFNHLEGKIL EPISKLINLK RLDLSFLNTS YPIDLNLLSP LKSLSYLDFS GNSLSPASLS SSSYIPLSME SIVLSLCGIR EFPNILKHLQ
401: NLIHIDITSN QIKGKIPEWL WTLPQLSFVD ISNNSFNGFQ GSAEVFVNLS VRILMLDANN FEGALPTLPL SIIGFSAIHN SFTGEIPLSI CNRTSLTMVD
501: LSYNNFTGPI PQCLSNFMFV NLRKNDLEGS IPDTFYTDSS LKSLDVGYNR LTGKLPRSLL NCSSLRFLSV DNNRVKDTFP FWLKALPNLR VLTLRSNKFY
601: GPISPPHQGP LGFPELRIFE IADNMFTGSL PPSFFVNWKA SALTKNEDGG LYMVYEYDKA ANSPVRYTYT DTIDLQYKGL HMEQERVLTS YAAIDFSGNR
701: LQGQIPESIG LLKALIALNL SNNAFTGHIP LSFANLMNLE SLDMSGNQLS GTIPNGLGSL SFLVYISVAH NKLKGEIPQG TQITGQIKSS FEGNAGLCGL
801: PLQETCFDSS VPPIQPKQED EEKGEVINWK AVAIGYAPGL LFGLAIAHLI ASYKPEWLVK IIGF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)