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AT2G32990.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
extracellular 1.000
ASURE: extracellular
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : glycosyl hydrolase 9B8
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
glycosyl hydrolase 9B8 (GH9B8); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Glycoside hydrolase, family 9, active site (InterPro:IPR018221), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase 9C2 (TAIR:AT1G64390.1); Has 1753 Blast hits to 1740 proteins in 252 species: Archae - 2; Bacteria - 582; Metazoa - 189; Fungi - 17; Plants - 922; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G32990-MONOMERCAZy:GH9EC:3.2.1.4eggNOG:ENOG410IDXWeggNOG:ENOG410XPC9EMBL:AC003033EMBL:AY062439
EMBL:BT008885EMBL:CP002685EnsemblPlants:AT2G32990EnsemblPlants:AT2G32990.1entrez:817861Gene3D:1.50.10.10GeneID:817861
Genevisible:O48766GO:GO:0005576GO:GO:0008810GO:GO:0030245GO:GO:0071555Gramene:AT2G32990.1gramene_pathway:3.2.1.4
gramene_pathway:PWY-1001hmmpanther:PTHR22298hmmpanther:PTHR22298:SF59HOGENOM:HOG000021033InParanoid:O48766InterPro:IPR001701InterPro:IPR008928
InterPro:IPR012341InterPro:IPR018221KEGG:00500+3.2.1.4KEGG:ath:AT2G32990OMA:EHYICSCPaxDb:O48766Pfam:O48766
Pfam:PF00759PhylomeDB:O48766PIR:T01108PRIDE:O48766PRO:PR:O48766PROSITE:PS00592ProteinModelPortal:O48766
Proteomes:UP000006548RefSeq:NP_180858.1scanprosite:PS00592SMR:O48766STRING:3702.AT2G32990.1SUPFAM:SSF48208TAIR:AT2G32990
tair10-symbols:AtGH9B8tair10-symbols:GH9B8TMHMM:TMhelixUniGene:At.12479UniProt:O48766
Coordinates (TAIR10) chr2:+:14003361..14005844
Molecular Weight (calculated) 59090.40 Da
IEP (calculated) 5.99
GRAVY (calculated) -0.38
Length 525 amino acids
Sequence (TAIR10)
(BLAST)
001: MTVMNHRHKQ CHFLLLLLIT VFSAALDGVS SETDVGGFDY GEALSKSLLY FEAQRSGRLP YNQRVTWRDH SGLTDGLEQG VDLVGGYHDA GDHVKFGLPM
101: AFTVTMLSWS VIEYGDSLAS TGELSHALEA IKWGTDYFIK AHTSPNVLWA EVGDGDTDHY CWQRPEDMTT SRRAFKIDEN NPGSDIAGET AAAMAAASIV
201: FRSTNPHYSH LLLHHAQQLF EFGDKYRGKY DESLKVVKSY YASVSGYMDE LLWGATWLYR ATDNEHYMSY VVDMAHQLGG LSWAMSEFSW DVKFAGVQLL
301: ASMLLKEEKH KQHSKVLQQY KSKADHYLCS ILNKNINGTN VQRTPAGLLY VRQWNNMQYV STASFLLTVY SDHLRKSNTD LECHEGTVTP DEMLGFAKSQ
401: IDYILGSNPM ETSYLVGYGP KYPIRVHHRG ASIASFKEHK GFIGCTQGYD NWYGRSEPNP SVLVGALVGG PDHQDDFDDR RGNYVQTEAC TYNTAPLVGV
501: FARLIELEEQ KLEEEDVSLV ATYKR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)