suba logo
AT2G32750.1
Subcellular Consensus
(Prediction and Experimental)

min: heatmap :max

.
SUBAcon:
extracellular 0.995
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Exostosin family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Exostosin family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: galactosyltransferase 13 (TAIR:AT2G32740.1); Has 675 Blast hits to 673 proteins in 35 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 4; Plants - 651; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink).
Protein Annotations
CAZy:GT47EC:2.4.1.-eggNOG:ENOG410XTFHeggNOG:KOG1021EMBL:AC003974EMBL:CP002685EMBL:KJ138877
EnsemblPlants:AT2G32750EnsemblPlants:AT2G32750.1entrez:817835GeneID:817835GO:GO:0005794GO:GO:0016021GO:GO:0016757
Gramene:AT2G32750.1hmmpanther:PTHR11062hmmpanther:PTHR11062:SF64HOGENOM:HOG000239726IntAct:O48842InterPro:IPR004263KEGG:ath:AT2G32750
OMA:GSWYSTNPaxDb:O48842Pfam:PF03016PhylomeDB:O48842PIR:T00793ProteinModelPortal:O48842Proteomes:UP000006548
RefSeq:NP_180834.1STRING:3702.AT2G32750.1TAIR:AT2G32750TMHMM:TMhelixUniGene:At.66294UniProt:O48842
Coordinates (TAIR10) chr2:+:13889641..13891170
Molecular Weight (calculated) 59138.60 Da
IEP (calculated) 8.97
GRAVY (calculated) -0.25
Length 509 amino acids
Sequence (TAIR10)
(BLAST)
001: MMKPVPKLWV VISSAFVFCL LVLFQINKSD LIEANLQITH QVNNFLISFV ASSNNQILNH TKHANESDGI RAKQLEEEET DTCAGRYIYM YNLPSTFNDD
101: IIKECRPLIK WFDMCPFMVN SGLGPQILVS DKTTARVLTV KTGSWYSTNQ FLLSVIFRER MKHYECLTNN SSLASAIYVP YYAGFDVSRH LWGYNVTVRD
201: ELAIKLAQWL RERPEWGKMY GRDHFFVTGR IGWDFRRFHD EDSDWGSKLM LLPEFSNLTM LGIETTAWAN EFAIPYPTYF HPKSLTEIWR WQKKVKSVKR
301: KYLFSFVGGP RPKLDGSIRG EIIKQCLASH GKCNFLNCFV NDCDNPVKIM KVFENSVFCL QPSGDSYTRR SIFDSILAGC IPVFFSPGSG YNQYIWYFPK
401: DYTKYSVYIP ENEMRNGTVS LKNILGMIAK ERILRMRKEV VKIIPKIIYN KPGFGPEKIE DAFDIAVDRM LERVAMVKRM MEEGKDVQSQ YYSQTKDLKK
501: LEIIHEKTA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)