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AT2G32680.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
extracellular 0.987
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : receptor like protein 23
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
receptor like protein 23 (RLP23); FUNCTIONS IN: kinase activity; INVOLVED IN: signal transduction, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 24 (TAIR:AT2G33020.1); Has 122044 Blast hits to 32861 proteins in 1177 species: Archae - 60; Bacteria - 10426; Metazoa - 30931; Fungi - 1442; Plants - 70180; Viruses - 48; Other Eukaryotes - 8957 (source: NCBI BLink).
Protein Annotations
eggNOG:COG4886eggNOG:KOG0619EMBL:AC003974EMBL:CP002685EnsemblPlants:AT2G32680EnsemblPlants:AT2G32680.1entrez:817828
Gene3D:3.80.10.10GeneID:817828Gramene:AT2G32680.1hmmpanther:PTHR27004hmmpanther:PTHR27004:SF37HOGENOM:HOG000116562InterPro:IPR001611
InterPro:IPR003591InterPro:IPR032675KEGG:ath:AT2G32680ncoils:CoilOMA:FISATIPPfam:PF00560Pfam:PF13516
Pfam:PF13855Pfscan:PS51450PhylomeDB:O48849PIR:T00800PROSITE:PS51450Proteomes:UP000006548RefSeq:NP_180827.1
SMART:SM00369SMR:O48849STRING:3702.AT2G32680.1SUPFAM:SSF52058TAIR:AT2G32680tair10-symbols:AtRLP23tair10-symbols:RLP23
TMHMM:TMhelixUniGene:At.66389UniProt:O48849
Coordinates (TAIR10) chr2:-:13859942..13862614
Molecular Weight (calculated) 98487.90 Da
IEP (calculated) 6.72
GRAVY (calculated) -0.06
Length 890 amino acids
Sequence (TAIR10)
(BLAST)
001: MSKALLHLHF LSLFLLCCVC HSSIFTLNFH FTGIVACRPH QIQAFTKFTN EFDTRGCNNS DTFNGVWCDN STGAVAVLQL RKCLSGTLKS NSSLFGFHQL
101: RYVDLQNNNL TSSSLPSGFG NLKRLEGLFL SSNGFLGQVP SSFSNLTMLA QLDLSYNKLT GSFPLVRGLR KLIVLDLSYN HFSGTLNPNS SLFELHQLRY
201: LNLAFNNFSS SLPSKFGNLH RLENLILSSN GFSGQVPSTI SNLTRLTKLY LDQNKLTSSF PLVQNLTNLY ELDLSYNKFF GVIPSSLLTL PFLAHLALRE
301: NNLAGSVEVS NSSTSSRLEI MYLGSNHFEG QILEPISKLI NLKHLDLSFL NTSYPIDLKL FSSLKSLRSL DLSGNSISSA SLSSDSYIPL TLEMLTLRHC
401: DINEFPNILK TLKELVYIDI SNNRMKGKIP EWLWSLPLLQ SVTLGNNYFT GFQGSAEILV NSSVLLLYLD SNNFEGALPD LPLSIKGFGV ASNSFTSEIP
501: LSICNRSSLA AIDLSYNNFT GPIPPCLRNL ELVYLRNNNL EGSIPDALCD GASLRTLDVS HNRLTGKLPR SFVNCSSLKF LSVINNRIED TFPFWLKALP
601: NLQVLTLRSN RFYGPISPPH QGPLGFPELR IFEISDNKFT GSLPPNYFVN WKASSRTMNQ DGGLYMVYEE KLFDEGGYGY TDALDLQYKG LHMEQAKALT
701: SYAAIDFSGN RLEGQIPESI GLLKALIAVN ISNNAFTGHI PLSMANLENL ESLDMSRNQL SGTIPNGLGS ISFLAYINVS HNQLTGEIPQ GTQITGQSKS
801: SFEGNAGLCG LPLKESCFGT GAPPMYHQKQ EDKEEEEEEE EEEEEVLNGR AVAIGYGSGL LLGLAIAQVI ASYKPEWLVK IIGLNKRRKR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)