AT2G32680.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : receptor like protein 23 | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
receptor like protein 23 (RLP23); FUNCTIONS IN: kinase activity; INVOLVED IN: signal transduction, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 24 (TAIR:AT2G33020.1); Has 122044 Blast hits to 32861 proteins in 1177 species: Archae - 60; Bacteria - 10426; Metazoa - 30931; Fungi - 1442; Plants - 70180; Viruses - 48; Other Eukaryotes - 8957 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:13859942..13862614 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 98487.90 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.72 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.06 | ||||||||||||||||||||||||||||||||||||||||
| Length | 890 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSKALLHLHF LSLFLLCCVC HSSIFTLNFH FTGIVACRPH QIQAFTKFTN EFDTRGCNNS DTFNGVWCDN STGAVAVLQL RKCLSGTLKS NSSLFGFHQL 101: RYVDLQNNNL TSSSLPSGFG NLKRLEGLFL SSNGFLGQVP SSFSNLTMLA QLDLSYNKLT GSFPLVRGLR KLIVLDLSYN HFSGTLNPNS SLFELHQLRY 201: LNLAFNNFSS SLPSKFGNLH RLENLILSSN GFSGQVPSTI SNLTRLTKLY LDQNKLTSSF PLVQNLTNLY ELDLSYNKFF GVIPSSLLTL PFLAHLALRE 301: NNLAGSVEVS NSSTSSRLEI MYLGSNHFEG QILEPISKLI NLKHLDLSFL NTSYPIDLKL FSSLKSLRSL DLSGNSISSA SLSSDSYIPL TLEMLTLRHC 401: DINEFPNILK TLKELVYIDI SNNRMKGKIP EWLWSLPLLQ SVTLGNNYFT GFQGSAEILV NSSVLLLYLD SNNFEGALPD LPLSIKGFGV ASNSFTSEIP 501: LSICNRSSLA AIDLSYNNFT GPIPPCLRNL ELVYLRNNNL EGSIPDALCD GASLRTLDVS HNRLTGKLPR SFVNCSSLKF LSVINNRIED TFPFWLKALP 601: NLQVLTLRSN RFYGPISPPH QGPLGFPELR IFEISDNKFT GSLPPNYFVN WKASSRTMNQ DGGLYMVYEE KLFDEGGYGY TDALDLQYKG LHMEQAKALT 701: SYAAIDFSGN RLEGQIPESI GLLKALIAVN ISNNAFTGHI PLSMANLENL ESLDMSRNQL SGTIPNGLGS ISFLAYINVS HNQLTGEIPQ GTQITGQSKS 801: SFEGNAGLCG LPLKESCFGT GAPPMYHQKQ EDKEEEEEEE EEEEEVLNGR AVAIGYGSGL LLGLAIAQVI ASYKPEWLVK IIGLNKRRKR |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)