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AT2G32520.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:26781341 (2016): plasma membrane
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:21166475 (2011): cytosol
  • PMID:18431481 (2008): plastid
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : alpha/beta-Hydrolases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity, transferase activity, transferring acyl groups other than amino-acyl groups; INVOLVED IN: response to zinc ion; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase, active site (InterPro:IPR020610), Dienelactone hydrolase (InterPro:IPR002925); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G35420.2); Has 3505 Blast hits to 3505 proteins in 948 species: Archae - 38; Bacteria - 2818; Metazoa - 67; Fungi - 17; Plants - 98; Viruses - 0; Other Eukaryotes - 467 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0412eggNOG:KOG3043EMBL:AC004681EMBL:AK227683EMBL:BT006416EMBL:CP002685EnsemblPlants:AT2G32520
EnsemblPlants:AT2G32520.1entrez:817813ESTHER:arath-T26B15.8Gene3D:3.40.50.1820GeneID:817813GO:GO:0005829GO:GO:0009507
GO:GO:0010043GO:GO:0016747GO:GO:0016787Gramene:AT2G32520.1hmmpanther:PTHR17630HOGENOM:HOG000157121InterPro:IPR002925
InterPro:IPR020610InterPro:IPR029058KEGG:ath:AT2G32520KO:K01061OMA:VVWYGFPPfam:PF01738PhylomeDB:O80889
PIR:T02551ProMEX:O80889PROSITE:PS00099Proteomes:UP000006548RefSeq:NP_180811.1scanprosite:PS00099SMR:O80889
STRING:3702.AT2G32520.1SUPFAM:SSF53474TAIR:AT2G32520UniGene:At.38061UniProt:O80889
Coordinates (TAIR10) chr2:-:13805823..13807442
Molecular Weight (calculated) 25922.70 Da
IEP (calculated) 5.13
GRAVY (calculated) -0.16
Length 239 amino acids
Sequence (TAIR10)
(BLAST)
001: MADSAFRKIQ IQRDDTTFDA YVVGKDDAPG IVVIQEWWGV DFEIKNHAIK ISQLEPGFKA LIPDLYRGKV GLDTAEAQHL MDGLDWPGAI KDIRASVNWL
101: KSNGSKKVGV TGMCMGGALA IASSVLVPEV DAVVGFYGTP SSELADPAQA KAPIQAHFGE LDNFVGFSDV TAAKNLEEKL KASGVAHEVH IYPGNGHAFL
201: NRSPEGVSRR KSMGLSDEDE AAVELAWSRF TSWMKQYLA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)