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AT2G32380.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
extracellular 0.980
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Transmembrane protein 97, predicted
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Transmembrane protein 97, predicted; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transmembrane protein 97, predicted (InterPro:IPR016964); BEST Arabidopsis thaliana protein match is: Transmembrane protein 97, predicted (TAIR:AT1G05210.1); Has 585 Blast hits to 585 proteins in 19 species: Archae - 0; Bacteria - 1; Metazoa - 0; Fungi - 0; Plants - 558; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JR4FeggNOG:ENOG411240REMBL:AC005700EMBL:AK228313EMBL:AY088836EMBL:BT004769EMBL:CP002685
EnsemblPlants:AT2G32380EnsemblPlants:AT2G32380.1entrez:817799GeneID:817799GO:GO:0016021Gramene:AT2G32380.1hmmpanther:PTHR31204
hmmpanther:PTHR31204:SF1HOGENOM:HOG000242299IntAct:Q9ZV66InterPro:IPR016964InterPro:IPR033118KEGG:ath:AT2G32380OMA:VWHELLL
Pfam:PF10914Pfscan:PS51751PhylomeDB:Q9ZV66PIR:D84732PIRSF:PIRSF031032PROSITE:PS51751Proteomes:UP000006548
RefSeq:NP_565742.1STRING:3702.AT2G32380.1TAIR:AT2G32380TMHMM:TMhelixUniGene:At.13199UniProt:Q9ZV66
Coordinates (TAIR10) chr2:-:13746792..13747730
Molecular Weight (calculated) 18315.00 Da
IEP (calculated) 9.64
GRAVY (calculated) 0.69
Length 168 amino acids
Sequence (TAIR10)
(BLAST)
001: MGAFCKLIDA VLFLYFALMA VIAPLIDGQT SLPGDIFPAF IVDLNRWYID EFGDYLVKEK PHFLVGLVWH ELLLLWPLSI VNVYAILAGK SWFGTTSMVY
101: GASVVTSMAA ILGEMIGSGK ASEKLLMMYV PFMGVGILAL LRGLLSQSNK SGGAVGKRPA ILARRKRA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)