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AT2G32160.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.776
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: N2227-like (InterPro:IPR012901); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT2G32170.1); Has 482 Blast hits to 472 proteins in 199 species: Archae - 0; Bacteria - 2; Metazoa - 108; Fungi - 210; Plants - 66; Viruses - 0; Other Eukaryotes - 96 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410Z0B7eggNOG:KOG2798EMBL:CP002685EnsemblPlants:AT2G32160
EnsemblPlants:AT2G32160.1entrez:817775ExpressionAtlas:F4IST1Gene3D:3.40.50.150
GeneID:817775Gramene:AT2G32160.1hmmpanther:PTHR12303hmmpanther:PTHR12303:SF6
InterPro:IPR012901InterPro:IPR029063ncoils:CoilPaxDb:F4IST1
Pfam:PF07942PhylomeDB:F4IST1PRIDE:F4IST1ProteinModelPortal:F4IST1
Proteomes:UP000006548RefSeq:NP_850184.1SMART:SM01296STRING:3702.AT2G32160.3
SUPFAM:SSF53335TAIR:AT2G32160UniGene:At.13607UniProt:F4IST1
Coordinates (TAIR10) chr2:+:13662238..13665941
Molecular Weight (calculated) 47319.40 Da
IEP (calculated) 5.33
GRAVY (calculated) -0.43
Length 415 amino acids
Sequence (TAIR10)
(BLAST)
001: MISSSEMMAT EKAPEFVTAM ATETERIGNS REVDEEKISR KKNPEEEALE AKCLPGIISA YLNYPKAAEE NLKKCERSYQ KLSPAHKALV THFPMKLQRL
101: RRCILMNSHF IYNMLQAFEP PIDLSKHMRE PITGALSMEE LQREEHHHDH SLKNAEIRLN NKTCEFDGGH LNHDHGSAHV PLVDVNKVRW VIRNIVRDWG
201: AEGQRERDEC YKPILEELDS LFPDRHKEST RPACLVPGAG LGRLALEISC LGFRSQGNEV SYYMMLCSSF ILNYTQLPGE WTIYPWIHTN CNSLSDDDQL
301: RPISIPDIHP ASAGVTESFS MCRGDFVEVF NESSQAGMWD AVVTCFFIDT AHNIIEYIET ISKILKDGGV LINLGPLLYH FADEQGLENE MSIELSLEDV
401: KRVASHYGFE MEKKQ
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)