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AT2G32140.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : transmembrane receptors
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
transmembrane receptors; FUNCTIONS IN: transmembrane receptor activity; INVOLVED IN: signal transduction, defense response, innate immune response; LOCATED IN: intrinsic to membrane, chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF641, plant (InterPro:IPR006943), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: phloem protein 2 A5 (TAIR:AT1G65390.1); Has 1651 Blast hits to 1572 proteins in 54 species: Archae - 0; Bacteria - 11; Metazoa - 0; Fungi - 0; Plants - 1639; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Protein Annotations
EMBL:CP002685EnsemblPlants:AT2G32140EnsemblPlants:AT2G32140.1entrez:817773Gene3D:3.40.50.10140GeneID:817773GO:GO:0007165
GO:GO:0016021Gramene:AT2G32140.1hmmpanther:PTHR32009hmmpanther:PTHR32009:SF1InParanoid:F4ISS7InterPro:IPR000157InterPro:IPR006943
KEGG:ath:AT2G32140PaxDb:F4ISS7Pfam:PF01582Pfam:PF04859Pfscan:PS50104PRIDE:F4ISS7PROSITE:PS50104
ProteinModelPortal:F4ISS7Proteomes:UP000006548RefSeq:NP_180773.3SMART:SM00255SMR:F4ISS7STRING:3702.AT2G32140.1SUPFAM:SSF52200
TAIR:AT2G32140UniGene:At.38115UniGene:At.74259UniProt:F4ISS7
Coordinates (TAIR10) chr2:-:13655714..13657033
Molecular Weight (calculated) 39033.60 Da
IEP (calculated) 8.45
GRAVY (calculated) -0.31
Length 353 amino acids
Sequence (TAIR10)
(BLAST)
001: MAIASSSPSS SSNVSVIPTG PQVFISFRGK ELRKGFISFL VPALKKKNIN VFIDEHEVRG KDLISLFRRI GESKIALVIF SEGYTESKWC LDELVQIKKC
101: VDQKKIIAIP IFYKLDPAVV KGLKGKFGDK FRDLIERYHH EPERYQKWTE ALTSVSRTFA LCLPEHSDKS EKDFIRSIIK EVKKALSNIS RERNGDREEI
201: DDCFVVSERK LTTDMYDTPE VSTSTMRKVS SNNGVGVGTF KSQKPNFDDE DDDGDSLLKA LVAKLVASTT SIVAAYAELQ RAHSDAIQAA ETVVVDVKTL
301: SELIRSSNGG GGGSGSGSGS SLENQPRRSK VRKQVWAEVL GISSDSTIIL ECI
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)