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AT2G32100.1
Subcellular Consensus
(Prediction and Experimental)

min: heatmap :max

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SUBAcon:
nucleus 0.996
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : ovate family protein 16
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
ovate family protein 16 (OFP16); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF623 (InterPro:IPR006458); BEST Arabidopsis thaliana protein match is: ovate family protein 12 (TAIR:AT1G05420.1); Has 251 Blast hits to 251 proteins in 22 species: Archae - 0; Bacteria - 16; Metazoa - 0; Fungi - 0; Plants - 235; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IZ8IeggNOG:ENOG410YWPIEMBL:AC006223EMBL:AF370597EMBL:BT029532EMBL:CP002685EnsemblPlants:AT2G32100
EnsemblPlants:AT2G32100.1entrez:817770GeneID:817770Genevisible:Q9SKY9GO:GO:0005634GO:GO:0006351GO:GO:0045892
Gramene:AT2G32100.1hmmpanther:PTHR33057hmmpanther:PTHR33057:SF21HOGENOM:HOG000090646InParanoid:Q9SKY9InterPro:IPR006458KEGG:ath:AT2G32100
OMA:KCYSSPCPaxDb:Q9SKY9Pfam:PF04844Pfam:Q9SKY9Pfscan:PS51754PhylomeDB:Q9SKY9PIR:A84729
PRIDE:Q9SKY9PRO:PR:Q9SKY9PROSITE:PS51754Proteomes:UP000006548RefSeq:NP_180770.1STRING:3702.AT2G32100.1TAIR:AT2G32100
tair10-symbols:ATOFP16tair10-symbols:OFP16TIGRfam:TIGR01568TIGRFAMs:TIGR01568UniGene:At.13603UniProt:Q9SKY9
Coordinates (TAIR10) chr2:+:13647852..13648586
Molecular Weight (calculated) 27063.50 Da
IEP (calculated) 6.08
GRAVY (calculated) -0.47
Length 244 amino acids
Sequence (TAIR10)
(BLAST)
001: MPKILWKSLH LCFPSNLTKC YSSPCIPPSS ADPDGIIQPN RPSIVLLNNF NLLYHNDNHH HPHRVIDLPS SSTTTTPAAT SSSSTSSYES DISPDVSAAF
101: ASRRFFFSSP GRSNAITDSP EPRSREFSDN YDDATITSTK KKKKKVYDNS VTTTTTRLIS GGTAVTQHVD SPDPLTDFRR SMQEMIDAAI DAGELSRDPN
201: DGYDFLDELL LTYLSLNPAD THKFVIRAFS DILVSLLSEE RRIC
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)