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AT2G31900.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
peroxisome 0.986
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : myosin-like protein XIF
Curator
Summary (TAIR10)
Encodes an novel myosin isoform.
Computational
Description (TAIR10)
myosin-like protein XIF (XIF); CONTAINS InterPro DOMAIN/s: Dil domain (InterPro:IPR018444), Dilute (InterPro:IPR002710), Myosin, N-terminal, SH3-like (InterPro:IPR004009), Myosin head, motor domain (InterPro:IPR001609), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: Myosin family protein with Dil domain (TAIR:AT5G20490.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Protein Annotations
BioGrid:3095eggNOG:COG5022eggNOG:KOG0160EMBL:AC006533EMBL:CP002685EnsemblPlants:AT2G31900EnsemblPlants:AT2G31900.1
entrez:817748Gene3D:3.40.50.300GeneID:817748Genevisible:F4IRU3GO:GO:0003774GO:GO:0005524GO:GO:0016461
GO:GO:0030048Gramene:AT2G31900.1hmmpanther:PTHR13140hmmpanther:PTHR13140:SF270HOGENOM:HOG000029608InParanoid:F4IRU3IntAct:F4IRU3
InterPro:IPR000048InterPro:IPR001609InterPro:IPR002710InterPro:IPR004009InterPro:IPR027417KEGG:ath:AT2G31900KO:K10357
ncoils:CoilOMA:IIHEKEAPaxDb:F4IRU3Pfam:F4IRU3Pfam:PF00063Pfam:PF00612Pfam:PF01843
Pfam:PF02736Pfscan:PS50096Pfscan:PS51126Pfscan:PS51456PIR:E84726PIR:S51821PRIDE:F4IRU3
PRINTS:PR00193PRO:PR:F4IRU3PROSITE:PS50096PROSITE:PS51126PROSITE:PS51456ProteinModelPortal:F4IRU3Proteomes:UP000006548
RefSeq:NP_180749.2SMART:SM00015SMART:SM00242SMART:SM01132STRING:3702.AT2G31900.1SUPFAM:SSF52540TAIR:AT2G31900
tair10-symbols:ATMYO5tair10-symbols:ATXIFtair10-symbols:XIFUniGene:At.53001UniProt:F4IRU3
Coordinates (TAIR10) chr2:-:13560760..13569623
Molecular Weight (calculated) 176980.00 Da
IEP (calculated) 8.24
GRAVY (calculated) -0.47
Length 1556 amino acids
Sequence (TAIR10)
(BLAST)
0001: MGTPVNITLG SHVWVEDPEL AWISGEVTEI KGTNAKIVTA NGKTVVASIS SIYPKDTEAP PAGVDDMTKL AYLHEPGVLH NLDCRFALNE IYTYTGNILI
0101: AVNPFQRLPH LYSVHMMEQY KGAAFGELSP HLFAVADTSY RAMINEARSQ SILVSGESGA GKTETTKMLM RYLAFMGGRS DTEGRSVEQQ VLESNPVLEA
0201: FGNAKTVKNN NSSRFGKFVE IQFDKRGKIS GAAIRTYLLE RSRVCQVSDP ERNYHCFYML CAAPPEEAKK FKVGDPRTFH YLNQTNCYEV SNVDDAREYL
0301: ETRNAMDIVG IGQEAQDAIF RVVAAILHLG NVNFIKGEEA DSSKLRDDKS RYHLQTAAEL LMCNEKMMED SLCKRVIVTP DGNITKPLDP ESAASNRDAL
0401: AKTVYSRLFD WIVDKINSSI GQDPDAKSLI GVLDIYGFES FKINSFEQLC INLTNEKLQQ HFNQHVFKME QEEYTREEIN WSYVEFVDNQ DVLDLIEKKP
0501: GGIIALLDEA CMFPKSTHET FAQKMYQTYK GHKRFSKPKL AQTAFTVNHY AGDVTYSAEQ FLDKNKDYVV AEHQALLDAS KCSFVANLFP PLPEDASKQS
0601: KFSSIGTRFK QQLQALMETL NTTEPHYIRC VKPNAVLKPG IFENDNVLNQ LRCGGVLEAI RISCAGYPTK RAFDEFLDRF VMLATDVPEG SDEKSACASI
0701: CNKMGLKGYQ IGKTKIFLRA GQMAELDARR TEVLAGATKL IQRQIRTYLT RKEFLGQKRA TIYMQKLWRA KLARKLYQNM RREAASICIQ KNIRAHRARK
0801: NYTKLQASAT VIQTGLRTMS ARNKHRHRRR TKAAIIIQRE WRRHQVHEAY KKHKKATLAL QCLWRAKVAR KELKNLRMAA RETGALKEAK DKLEKRVEEL
0901: TWRLELEKNQ KADLEDAKAQ EIAKLQNNLT ELQEKLDEAY AAIIRDKEAA KLAIEQAPPI IKEVPVVDNT QLELLNSQNN ELEVEVAKLK GKIKEFEVKC
1001: FALENDSRAS VTEAEDAKSK AVEFQEIIER LHTNLSNLES ENQVLRQQAL AASTSVEEIG ELNSLKDKVA ILESENETLR RQTESAEKTM PPARVFASEK
1101: NLENEHQTKE IQATKEPRNP INVLAKQGSL TDRQQESHEV LMKCLTDERR FDNEKSVAAW IVYKALLQWR LFEAEKTNIF DRIVHKIRSS IEGQDDTREL
1201: AYWLTTSSTL LYLLQSTLKF SNTNNAASRR NRSSHATLFG RLVQGMQPSS VGLETSSGYS GMAGIPNDQQ MVEAKYPALL FKQHLAAYVE KTYGMIRDKL
1301: KKEINPLLNL CIHAPRPTRA KTLRDVTKSI HLTTIAKQQA SYVQWQNIVN KLEHTLTFMA ENHVPSMITR KLFHQVFSYI NVQLFNSLLL RRECCSVSNG
1401: EYLKMGLHEL EQWCLKADDE ATRSPWDELQ HIRQAVMFLV SHQKTQKSLD EIAKEICPVL SIPQVYRIGT MFWDDKYGTQ GLSPEVINQM RKLMTEDSAN
1501: MTYPSFLLDV DSSIPFSVED VSQSFHGGNI SLSDVDPSPL LRQRSDFHFL FQTLPE
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)