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AT2G31880.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Leucine-rich repeat protein kinase family protein
Curator
Summary (TAIR10)
Encodes a putative leucine rich repeat transmembrane protein that is expressed in response to Pseudomonas syringae. Expression of SRRLK may be required for silencing via lsiRNAs. Regulates cell death and innate immunity.
Computational
Description (TAIR10)
SUPPRESSOR OF BIR1 1 (SOBIR1); FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, transmembrane receptor protein tyrosine kinase signaling pathway, positive regulation of defense response, negative regulation of floral organ abscission, positive regulation of cell death; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G63930.1); Has 176453 Blast hits to 132218 proteins in 4789 species: Archae - 165; Bacteria - 16198; Metazoa - 50399; Fungi - 11231; Plants - 77353; Viruses - 425; Other Eukaryotes - 20682 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G31880-MONOMERBioGrid:3093EC:2.7.10.1EC:2.7.11.1eggNOG:COG0515eggNOG:ENOG410IH4CEMBL:AC006533
EMBL:AF370596EMBL:AY058153EMBL:CP002685EMBL:FJ708707EnsemblPlants:AT2G31880EnsemblPlants:AT2G31880.1entrez:817746
Gene3D:3.80.10.10GeneID:817746Genevisible:Q9SKB2GO:GO:0004674GO:GO:0004713GO:GO:0004714GO:GO:0005524
GO:GO:0005886GO:GO:0006952GO:GO:0010942GO:GO:0016021GO:GO:0018108GO:GO:0031349Gramene:AT2G31880.1
hmmpanther:PTHR27000hmmpanther:PTHR27000:SF9HOGENOM:HOG000071072InParanoid:Q9SKB2InterPro:IPR000719InterPro:IPR001611InterPro:IPR008271
InterPro:IPR011009InterPro:IPR032675KEGG:ath:AT2G31880OMA:QHTDEMSPaxDb:Q9SKB2Pfam:PF00069Pfam:PF13855
Pfam:Q9SKB2Pfscan:PS50011Pfscan:PS51450PhylomeDB:Q9SKB2PIR:C84726PRIDE:Q9SKB2PRO:PR:Q9SKB2
PROSITE:PS00108PROSITE:PS50011PROSITE:PS51450ProteinModelPortal:Q9SKB2Proteomes:UP000006548RefSeq:NP_180747.1scanprosite:PS00108
SMART:SM00220SMR:Q9SKB2STRING:3702.AT2G31880.1SUPFAM:SSF52058SUPFAM:SSF56112SwissPalm:Q9SKB2TAIR:AT2G31880
tair10-symbols:EVRtair10-symbols:SOBIR1TMHMM:TMhelixUniGene:At.13945UniGene:At.75587UniProt:Q9SKB2
Coordinates (TAIR10) chr2:+:13554920..13556845
Molecular Weight (calculated) 71115.50 Da
IEP (calculated) 9.61
GRAVY (calculated) -0.16
Length 641 amino acids
Sequence (TAIR10)
(BLAST)
001: MAVPTGSANL FLRPLILAVL SFLLLSSFVS SVEWLDIDSS DLKALQVIET ELGVNSQRSS ASDVNPCGRR GVFCERRHSA TTGEYVLRVT RLVYRSRSLT
101: GTISPVIGML SELKELTLSN NQLVNAVPVD ILSCKQLEVL DLRKNRFSGQ IPGNFSSLSR LRILDLSSNK LSGNLNFLKN LRNLENLSVA NNLFSGKIPE
201: QIVSFHNLRF FDFSGNRYLE GPAPVMSSIK LQTSPHQTRH ILAETPTSSP TNKPNNSTTS KAPKGAPKPG KLKKKKKKSK KKKVAAWILG FVVGAIGGTI
301: SGFVFSVLFK LIIQAIRGSE KPPGPSIFSP LIKKAEDLAF LENEEALASL EIIGRGGCGE VFKAELPGSN GKIIAVKKVI QPPKDADELT DEDSKFLNKK
401: MRQIRSEINT VGHIRHRNLL PLLAHVSRPE CHYLVYEYME KGSLQDILTD VQAGNQELMW PARHKIALGI AAGLEYLHMD HNPRIIHRDL KPANVLLDDD
501: MEARISDFGL AKAMPDAVTH ITTSHVAGTV GYIAPEFYQT HKFTDKCDIY SFGVILGILV IGKLPSDEFF QHTDEMSLIK WMRNIITSEN PSLAIDPKLM
601: DQGFDEQMLL VLKIACYCTL DDPKQRPNSK DVRTMLSQIK H
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)