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AT2G31870.1
Subcellular Consensus
(Prediction and Experimental)

min: heatmap :max

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SUBAcon:
cytosol 0.997
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Poly (ADP-ribose) glycohydrolase (PARG)
Curator
Summary (TAIR10)
mutant has Long free-running circadian period; Poly (ADP-ribose) Glycohydrolase
Computational
Description (TAIR10)
Sanskrit for 'bright' (TEJ); CONTAINS InterPro DOMAIN/s: Poly(ADP-ribose) glycohydrolase (InterPro:IPR007724); BEST Arabidopsis thaliana protein match is: poly(ADP-ribose) glycohydrolase 2 (TAIR:AT2G31865.2); Has 554 Blast hits to 370 proteins in 95 species: Archae - 0; Bacteria - 0; Metazoa - 332; Fungi - 10; Plants - 60; Viruses - 0; Other Eukaryotes - 152 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G31870-MONOMERBioCyc:ARA:GQT-690-MONOMERBioGrid:3092EC:3.2.1.143eggNOG:ENOG410XT3YeggNOG:KOG2064EMBL:AC006533
EMBL:AF394690EMBL:AK222165EMBL:CP002685EnsemblPlants:AT2G31870EnsemblPlants:AT2G31870.1entrez:817745ExpressionAtlas:Q9SKB3
GeneID:817745Genevisible:Q9SKB3GO:GO:0004649GO:GO:0005975GO:GO:0006282GO:GO:0006970GO:GO:0006974
GO:GO:0006979GO:GO:0009414GO:GO:0048511GO:GO:0050832GO:GO:0090332hmmpanther:PTHR12837HOGENOM:HOG000240549
InParanoid:Q9SKB3InterPro:IPR007724OMA:SMADNEAPANTHER:PTHR12837PaxDb:Q9SKB3Pfam:PF05028Pfam:Q9SKB3
PhylomeDB:Q9SKB3PIR:B84726PRIDE:Q9SKB3PRO:PR:Q9SKB3ProteinModelPortal:Q9SKB3Proteomes:UP000006548Reactome:R-ATH-110362
RefSeq:NP_565730.1SMR:Q9SKB3STRING:3702.AT2G31870.1TAIR:AT2G31870tair10-symbols:TEJUniGene:At.26160UniProt:Q9SKB3
Coordinates (TAIR10) chr2:-:13549999..13553756
Molecular Weight (calculated) 62173.20 Da
IEP (calculated) 5.18
GRAVY (calculated) -0.18
Length 548 amino acids
Sequence (TAIR10)
(BLAST)
001: MENREDLNSI LPYLPLVIRS SSLYWPPRVV EALKAMSEGP SHSQVDSGEV LRQAIFDMRR SLSFSTLEPS ASNGYAFLFD ELIDEKESKR WFDEIIPALA
101: SLLLQFPSLL EVHFQNADNI VSGIKTGLRL LNSQQAGIVF LSQELIGALL ACSFFCLFPD DNRGAKHLPV INFDHLFASL YISYSQSQES KIRCIMHYFE
201: RFCSCVPIGI VSFERKITAA PDADFWSKSD VSLCAFKVHS FGLIEDQPDN ALEVDFANKY LGGGSLSRGC VQEEIRFMIN PELIAGMLFL PRMDDNEAIE
301: IVGAERFSCY TGYASSFRFA GEYIDKKAMD PFKRRRTRIV AIDALCTPKM RHFKDICLLR EINKALCGFL NCSKAWEHQN IFMDEGDNEI QLVRNGRDSG
401: LLRTETTASH RTPLNDVEMN REKPANNLIR DFYVEGVDNE DHEDDGVATG NWGCGVFGGD PELKATIQWL AASQTRRPFI SYYTFGVEAL RNLDQVTKWI
501: LSHKWTVGDL WNMMLEYSAQ RLYKQTSVGF FSWLLPSLAT TNKAIQPP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)