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AT2G31862.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.636
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF313 (InterPro:IPR005508); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF313) (TAIR:AT2G31720.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Protein Annotations
BioGrid:30185EMBL:AC006533EMBL:AY648326EMBL:AY773856
EMBL:CP002685EnsemblPlants:AT2G31862EnsemblPlants:AT2G31862.1entrez:2745575
GeneID:2745575GO:GO:0003677GO:GO:0005634GO:GO:0006351
GO:GO:0006355Gramene:AT2G31862.1hmmpanther:PTHR31541IntAct:Q6DSS2
InterPro:IPR015300KEGG:ath:AT2G31862PaxDb:Q6DSS2Pfam:Q6DSS2
PhylomeDB:Q6DSS2PRIDE:Q6DSS2PRO:PR:Q6DSS2Proteomes:UP000006548
RefSeq:NP_973577.1SUPFAM:SSF101936TAIR:AT2G31862UniGene:At.66286
UniProt:Q6DSS2
Coordinates (TAIR10) chr2:+:13545770..13546294
Molecular Weight (calculated) 19624.60 Da
IEP (calculated) 5.01
GRAVY (calculated) -0.09
Length 174 amino acids
Sequence (TAIR10)
(BLAST)
001: MWVNLSCMCH IVDKLLELNL RRWNMRSTSI YVLASRWKKV VSDNTLIEGQ RIRLWSFHSL AKLYIALVPL DPAPAPTLAI LLAPAPTPSS PPVVTRDSDE
101: LYISHADAQE EGDRILPVHA DNDWECLNLL AKVSEETTCL EVSQEANRRS SLVSDTELDL ELRLSLPGKN SYVM
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)