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AT2G31670.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
peroxisome 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Stress responsive alpha-beta barrel domain protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Stress responsive alpha-beta barrel domain protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: peroxisome, chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Stress responsive alpha-beta barrel (InterPro:IPR013097), Dimeric alpha-beta barrel (InterPro:IPR011008); BEST Arabidopsis thaliana protein match is: dimeric A/B barrel domainS-protein 1 (TAIR:AT1G51360.1); Has 222 Blast hits to 216 proteins in 57 species: Archae - 0; Bacteria - 79; Metazoa - 0; Fungi - 4; Plants - 128; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IVW4eggNOG:ENOG4111VSHEMBL:AC007071EMBL:AK228524EMBL:BT010905EMBL:BT011004EMBL:CP002685
EnsemblPlants:AT2G31670EnsemblPlants:AT2G31670.1entrez:817723GeneID:817723GO:GO:0005777GO:GO:0009507GO:GO:0009570
Gramene:AT2G31670.1hmmpanther:PTHR33178hmmpanther:PTHR33178:SF3HOGENOM:HOG000242441InterPro:IPR011008InterPro:IPR013097KEGG:ath:AT2G31670
OMA:YSAHPDHPfam:PF07876Pfscan:PS51502PhylomeDB:Q9SIP1PIR:F84723PROSITE:PS51502Proteomes:UP000006548
RefSeq:NP_180725.1SMART:SM00886SUPFAM:SSF54909TAIR:AT2G31670UniGene:At.14359UniProt:Q9SIP1
Coordinates (TAIR10) chr2:-:13472699..13473490
Molecular Weight (calculated) 28866.60 Da
IEP (calculated) 6.96
GRAVY (calculated) -0.03
Length 263 amino acids
Sequence (TAIR10)
(BLAST)
001: MICARIRPLI SSPLAFTIST TKHSRINLRL LPRRSFSVMS SSTPQSQIIE HIVLFKTKDD ADSTKITSMI NNLNALAYLD QVLHISTSPL HRISSATAFT
101: HVLHSRYESK EDLASYAAHP DHVRVVKESV LPICDDIMAV DWIADRIPGT VAPLPGSVAK LTLLKLKEDV ADEAKSEITG VIKGLSEKFP GIDQITVGEN
201: FSPARAKGFS IASIAYFKDL SEMEAVDAQK ELVNSQKDKV RDYVDSTIVV EFVVPSSSQS SSL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)