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AT2G31510.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : IBR domain-containing protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
ARIADNE 7 (ARI7); FUNCTIONS IN: zinc ion binding, nucleic acid binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C6HC-type (InterPro:IPR002867), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, CCHC-type (InterPro:IPR001878); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G05890.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Protein Annotations
EC:6.3.2.-eggNOG:ENOG410XP9YeggNOG:KOG1815EMBL:AC007071EMBL:AJ510210EMBL:BX820609EMBL:CP002685
EnsemblPlants:AT2G31510EnsemblPlants:AT2G31510.1entrez:817709Gene3D:3.30.40.10GeneID:817709Genevisible:Q84RR0GO:GO:0000151
GO:GO:0000209GO:GO:0003676GO:GO:0005737GO:GO:0008270GO:GO:0016874GO:GO:0031624GO:GO:0032436
GO:GO:0042787GO:GO:0061630Gramene:AT2G31510.1hmmpanther:PTHR11685hmmpanther:PTHR11685:SF154HOGENOM:HOG000243301InParanoid:Q84RR0
InterPro:IPR001841InterPro:IPR002867InterPro:IPR013083InterPro:IPR031127KEGG:ath:AT2G31510KO:K11968ncoils:Coil
OMA:PTVQCACPANTHER:PTHR11685PaxDb:Q84RR0Pfam:PF01485Pfam:Q84RR0Pfscan:PS50089PhylomeDB:Q84RR0
PIR:F84721PRIDE:Q84RR0PRO:PR:Q84RR0PROSITE:PS50089ProteinModelPortal:Q84RR0Proteomes:UP000006548RefSeq:NP_180709.3
SMART:SM00647SMR:Q84RR0STRING:3702.AT2G31510.1SUPFAM:SSF57850TAIR:AT2G31510tair10-symbols:ARI7tair10-symbols:ATARI7
UniGene:At.38208UniPathway:UPA00143UniProt:Q84RR0
Coordinates (TAIR10) chr2:-:13416991..13421170
Molecular Weight (calculated) 63981.50 Da
IEP (calculated) 4.83
GRAVY (calculated) -0.67
Length 562 amino acids
Sequence (TAIR10)
(BLAST)
001: MDSEEDMLDA HDMESGEDDF YSGGTDDCND SDDGEPDYGF VEEDADDSAM IASHRSQKNF CVLREEDIRR HQMDNIERVS VVLSITEVEA SILLRHFHWS
101: VGRVHDEWFA DEERVRKTVG ILESHVVPPS DDSELTCGIC FDSYPPEKIA SVSCGHPFCT TCWTGYISTT INDGPGCLML RCPDPSCLAA VGHDMVDKLA
201: SEDEKEKYNR YFLRSYIEDN RKMKWCPAPG CDFAIDFVAG SGNYDVSCLC SFSFCWNCTE EAHRPVDCST VSKWILKNSA ESENMNWILA NSKPCPRCKR
301: PIEKNQGCMH MTCTPPCKYE FCWLCLGAWM DHGERTGGFY ACNRYEVAKQ EGQYDETERR REMAKNSLER YTHYYERWAS NQTSRQKAMA DLQQAQMQNL
401: EKLSDKQCTP ESQLKFILEA WLQIIECRRV LKWTYAYGYY LPEHEHAKRQ FFEYLQGEAE SGLERLHQCV EKDLVQFLIA EGPSKDFNDF RTKLAGLTSV
501: TKNYFENLVK ALENGLADVD SHAACSSKST SSKSTGCSSK TRGKGKGSSR TGGSSRNPDD NL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)