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AT2G30970.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31911558 (2020): mitochondrion
  • PMID:31871212 (2020): mitochondrion
  • PMID:31818904 (2020): mitochondrion
  • PMID:31615849 (2019): plastid plastid thylakoid
  • PMID:31520498 (2020): mitochondrion
  • PMID:31186290 (2019): cytosol None
  • PMID:31023727 (2019): mitochondrion
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:27943495 (2017): mitochondrion
  • PMID:24727099 (2014): mitochondrion
  • PMID:24361574 (2014): plastid plastid stroma
  • PMID:24124904 (2013): plastid
  • PMID:23750852 (2013): mitochondrion
  • PMID:23673981 (2013): plastid plastid stroma plastoglobules
  • PMID:22968828 (2012): mitochondrion
  • PMID:22923678 (2012): mitochondrion
  • PMID:22574745 (2012): mitochondrion
  • PMID:22550958 (2012): plastid
  • PMID:22540835 (2012): mitochondrion
  • PMID:21896887 (2011): mitochondrion mitochondrial envelope mitochondrial outer membrane
  • PMID:21841088 (2011): mitochondrion
  • PMID:21533090 (2011): extracellular region plant-type cell wall
  • PMID:21472856 (2011): mitochondrion
  • PMID:21311031 (2011): mitochondrion
  • PMID:21296373 (2011): mitochondrion
  • PMID:19334764 (2009): plasma membrane
  • PMID:18385124 (2008): mitochondrion
  • PMID:15215502 (2004): plant-type vacuole
  • PMID:14671022 (2004): mitochondrion
  • PMID:11743115 (2001): mitochondrion
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : aspartate aminotransferase 1
Curator
Summary (TAIR10)
ASPARTATE AMINOTRANSFERASE 1
Computational
Description (TAIR10)
aspartate aminotransferase 1 (ASP1); FUNCTIONS IN: L-aspartate:2-oxoglutarate aminotransferase activity, copper ion binding; INVOLVED IN: response to cadmium ion; LOCATED IN: mitochondrion; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Aspartate/other aminotransferase (InterPro:IPR000796), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: aspartate aminotransferase 2 (TAIR:AT5G19550.1); Has 5625 Blast hits to 5619 proteins in 1351 species: Archae - 10; Bacteria - 3742; Metazoa - 486; Fungi - 406; Plants - 379; Viruses - 0; Other Eukaryotes - 602 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-1763-MONOMERBioGrid:2997EC:2.6.1.1eggNOG:COG1448
eggNOG:KOG1411EMBL:AC004669EMBL:AY059912EMBL:AY128806
EMBL:CP002685EMBL:U15026EnsemblPlants:AT2G30970EnsemblPlants:AT2G30970.1
EnsemblPlants:AT2G30970.2entrez:817648Gene3D:3.40.640.10GeneID:817648
Genevisible:P46643GO:GO:0004069GO:GO:0005507GO:GO:0005739
GO:GO:0005759GO:GO:0006103GO:GO:0006531GO:GO:0006536
GO:GO:0009058GO:GO:0030170GO:GO:0042802GO:GO:0046686
GO:GO:0080130Gramene:AT2G30970.1Gramene:AT2G30970.2gramene_pathway:2.6.1.1
gramene_pathway:ASPARTATESYN-PWYgramene_plant_reactome:1119281gramene_plant_reactome:1119393gramene_plant_reactome:1119553
gramene_plant_reactome:6875076gramene_plant_reactome:6877422gramene_plant_reactome:6877655HOGENOM:HOG000185898
InParanoid:P46643InterPro:IPR000796InterPro:IPR004838InterPro:IPR004839
InterPro:IPR015421InterPro:IPR015424KEGG:00220+2.6.1.1KEGG:00250+2.6.1.1
KEGG:00270+2.6.1.1KEGG:00330+2.6.1.1KEGG:00350+2.6.1.1KEGG:00360+2.6.1.1
KEGG:00400+2.6.1.1KEGG:00401+2.6.1.1KEGG:00710+2.6.1.1KEGG:00950+2.6.1.1
KEGG:00960+2.6.1.1KEGG:ath:AT2G30970KO:K14455MINT:MINT-8068948
OMA:SWANHAAPaxDb:P46643Pfam:P46643Pfam:PF00155
PhylomeDB:P46643PIR:H84714PRIDE:P46643PRINTS:PR00799
PRO:PR:P46643PROSITE:PS00105ProteinModelPortal:P46643Proteomes:UP000006548
Reactome:R-ATH-70263Reactome:R-ATH-70614RefSeq:NP_001118421.1RefSeq:NP_180654.1
SABIO-RK:P46643scanprosite:PS00105SMR:P46643STRING:3702.AT2G30970.1
SUPFAM:SSF53383TAIR:AT2G30970tair10-symbols:ASP1UniGene:At.513
UniProt:P46643
Coordinates (TAIR10) chr2:+:13179012..13181686
Molecular Weight (calculated) 47760.40 Da
IEP (calculated) 8.35
GRAVY (calculated) -0.30
Length 430 amino acids
Sequence (TAIR10)
(BLAST)
001: MALAMMIRNA ASKRGMTPIS GHFGGLRSMS SWWKSVEPAP KDPILGVTEA FLADPSPEKV NVGVGAYRDD NGKPVVLECV REAEKRLAGS TFMEYLPMGG
101: SAKMVDLTLK LAYGDNSEFI KDKRIAAVQT LSGTGACRLF ADFQKRFSPG SQIYIPVPTW SNHHNIWKDA QVPQKTYHYY HPETKGLDFS ALMDDVKNAP
201: EGSFFLLHAC AHNPTGVDPT EEQWREISQL FKAKKHFAFF DMAYQGFASG DPARDAKSIR IFLEDGHHIG ISQSYAKNMG LYGQRVGCLS VLCEDPKQAV
301: AVKSQLQQLA RPMYSNPPLH GAQLVSTILE DPELKSLWLK EVKVMADRII GMRTTLRESL EKLGSPLSWE HVTKQIGMFC YSGLTPEQVD RLTSEYHIYM
401: TRNGRISMAG VTTGNVGYLA NAIHEVTKSS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)