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AT2G30830.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.976
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Curator
Summary (TAIR10)
encodes a protein whose sequence is similar to 2-oxoglutarate-dependent dioxygenase
Computational
Description (TAIR10)
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT2G30840.1); Has 8436 Blast hits to 8403 proteins in 1008 species: Archae - 0; Bacteria - 1171; Metazoa - 115; Fungi - 900; Plants - 4884; Viruses - 0; Other Eukaryotes - 1366 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G30830-MONOMEReggNOG:COG3491eggNOG:KOG0143EMBL:AC004669EMBL:CP002685EnsemblPlants:AT2G30830EnsemblPlants:AT2G30830.1
entrez:817634Gene3D:2.60.120.330GeneID:817634GO:GO:0009815GO:GO:0046872GO:GO:0051213Gramene:AT2G30830.1
hmmpanther:PTHR10209hmmpanther:PTHR10209:SF122HOGENOM:HOG000276735InterPro:IPR005123InterPro:IPR026992InterPro:IPR027443KEGG:ath:AT2G30830
OMA:FCELAPDPfam:PF03171Pfam:PF14226Pfscan:PS51471PhylomeDB:O80850PIR:C84713PROSITE:PS51471
Proteomes:UP000006548RefSeq:NP_180641.1SMR:O80850STRING:3702.AT2G30830.1SUPFAM:SSF51197TAIR:AT2G30830UniGene:At.38308
UniProt:O80850
Coordinates (TAIR10) chr2:-:13132707..13134284
Molecular Weight (calculated) 40198.60 Da
IEP (calculated) 7.20
GRAVY (calculated) -0.23
Length 358 amino acids
Sequence (TAIR10)
(BLAST)
001: MAGNYDRAGE VKAFDQMKIG VKGLVDAGIT KVPRIFHHQD VAVTNPKPSS TLEIPTIDVG GGVFESTVTR KSVIAKVRAA VEKFGFFQVI NHGIPLEVME
101: SMKDGIRGFH EQDSEVKKTF YSRDITKKVK YNTNFDLYSS QAANWRDTLT MVMAPDVPQA GDLPVICREI MLEYSKRMMK LGELIFELLS EALGLKPNHL
201: KELNCAKSLS LLSHYYPPCP EPDRTFGISS HTDISFITIL LQDHIGGLQV LHDGYWIDVP PNPEALIVNL GDLLQLITND KFVSVEHRVL ANRGEEPRIS
301: SASFFMHTIP NEQVYGPMKE LLSKQNPPKY RNTTTTEMAR HYLARGLDGT SPLLHFRI
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)