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AT2G30695.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein folding, protein transport; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Trigger factor, ribosome-binding, bacterial (InterPro:IPR008881); Has 253 Blast hits to 253 proteins in 72 species: Archae - 0; Bacteria - 138; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IXRBeggNOG:ENOG410YJEJEMBL:AC002340EMBL:AF411777EMBL:AY094029EMBL:CP002685EnsemblPlants:AT2G30695
EnsemblPlants:AT2G30695.1EnsemblPlants:AT2G30695.2entrez:817620Gene3D:3.30.70.1050GeneID:817620GO:GO:0006457GO:GO:0009507
GO:GO:0009570GO:GO:0015031Gramene:AT2G30695.1Gramene:AT2G30695.2hmmpanther:PTHR30560hmmpanther:PTHR30560:SF4HOGENOM:HOG000006261
InterPro:IPR008881KEGG:ath:AT2G30695OMA:KISITQTPfam:PF05697PhylomeDB:Q945Q5Proteomes:UP000006548RefSeq:NP_565704.1
RefSeq:NP_973568.1SMR:Q945Q5STRING:3702.AT2G30695.1SUPFAM:SSF102735TAIR:AT2G30695UniGene:At.12260UniProt:Q945Q5
Coordinates (TAIR10) chr2:-:13079269..13081095
Molecular Weight (calculated) 22261.60 Da
IEP (calculated) 6.78
GRAVY (calculated) -0.28
Length 199 amino acids
Sequence (TAIR10)
(BLAST)
001: MQTIIHSLSF CSFNSTTINP KPRFQFSSFL TLPPTYSVQQ KLCTRATNRQ FVAVCAAPSD VETSSKDESV LITKVETETS NEVKVHVQVS GEKTQTVFNH
101: VFEKMVAAAQ PIPGFRRVKG GKTPNIPKDV LLEILGYSKV YKQVIKKLIN SAIEDYVKQE DLKVGKELTV VQSYEDLEET FEPGESFSFD ATIKLQEAS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)