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AT2G30580.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : DREB2A-interacting protein 2
Curator
Summary (TAIR10)
Encodes a C3HC4 RING-domain-containing ubiquitin E3 ligase capable of interacting with DREB2A. DRIP2 seems to be involved in regulating stress-related transcriptional changes and drought tolerance.
Computational
Description (TAIR10)
DREB2A-interacting protein 2 (DRIP2); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: DREB2A-interacting protein 1 (TAIR:AT1G06770.1); Has 1631 Blast hits to 1626 proteins in 163 species: Archae - 0; Bacteria - 2; Metazoa - 1227; Fungi - 58; Plants - 232; Viruses - 0; Other Eukaryotes - 112 (source: NCBI BLink).
Protein Annotations
BioGrid:2957EC:6.3.2.-eggNOG:ENOG410XPCNeggNOG:KOG2660EMBL:AY045618EMBL:BT000505EMBL:CP002685
EMBL:U93215EnsemblPlants:AT2G30580EnsemblPlants:AT2G30580.1entrez:817608Gene3D:3.30.40.10GeneID:817608Genevisible:Q94AY3
GO:GO:0004842GO:GO:0008270GO:GO:0009414GO:GO:0016567GO:GO:0016874GO:GO:0051865Gramene:AT2G30580.1
hmmpanther:PTHR10825hmmpanther:PTHR10825:SF28HOGENOM:HOG000240404InParanoid:Q94AY3IntAct:Q94AY3InterPro:IPR001841InterPro:IPR013083
InterPro:IPR017907KEGG:ath:AT2G30580KO:K16277OMA:EVEIRCCPaxDb:Q94AY3Pfam:PF00097Pfam:Q94AY3
Pfscan:PS50089PhylomeDB:Q94AY3PIR:B84710PRIDE:Q94AY3PRO:PR:Q94AY3PROSITE:PS00518PROSITE:PS50089
ProteinModelPortal:Q94AY3Proteomes:UP000006548RefSeq:NP_565702.1scanprosite:PS00518SMART:SM00184SMR:Q94AY3STRING:3702.AT2G30580.1
SUPFAM:SSF57850TAIR:AT2G30580tair10-symbols:DRIP2UniGene:At.14726UniPathway:UPA00143UniProt:Q94AY3
Coordinates (TAIR10) chr2:+:13026444..13030363
Molecular Weight (calculated) 47192.40 Da
IEP (calculated) 9.81
GRAVY (calculated) -0.70
Length 420 amino acids
Sequence (TAIR10)
(BLAST)
001: MEGDMVAKVK RETVVACMTC PLCDKLLRDA TTISECLHTF CRKCIYEKIT EDEIESCPVC DIDLGGTPLE KLRPDHILQD LRAKLFPLKR KKERAPEVVS
101: SISLPAKRKE RSISSLVVST PRVSAQAGTT GKRTKAATRK DVRGSGSFTK RTVKKEEEFG DDHVESASSP ETLKKFTQNK RQSSYANPNQ SLSNRRNKDV
201: DEPWDSKLHL WKPLNFLVDV ANGTKDPKSE LGNASHNDVQ GSKTKTKDHK RKCKLEEEIS NNGDPTTSET ATLKRTRRTR RKRSSTFGDS RIPLLPGAAS
301: LKQERRNGHV WFSLVASSNQ EGEASLPQIP ANYLRIRDGN IPVSFIQKYL MRKLDLKSED EVEITCMGEP VIPTLQLHSL VDLWLETTSK HQRVAASIGS
401: SAKEFVMVLV YSRKLPECNN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)