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AT2G30560.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 0.957
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : glycine-rich protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
glycine-rich protein; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot, carpel, cultured cell; EXPRESSED DURING: 4 anthesis; Has 188208 Blast hits to 49701 proteins in 2501 species: Archae - 445; Bacteria - 51994; Metazoa - 66635; Fungi - 12365; Plants - 18728; Viruses - 2697; Other Eukaryotes - 35344 (source: NCBI BLink).
Protein Annotations
EMBL:CP002685EMBL:U93215EnsemblPlants:AT2G30560EnsemblPlants:AT2G30560.1entrez:817605GeneID:817605Gramene:AT2G30560.1
hmmpanther:PTHR33333KEGG:ath:AT2G30560OMA:ICGQSSCPIR:H84709Proteomes:UP000006548RefSeq:NP_180614.1TAIR:AT2G30560
UniGene:At.66400UniProt:O04339
Coordinates (TAIR10) chr2:+:13017347..13018857
Molecular Weight (calculated) 14267.10 Da
IEP (calculated) 10.51
GRAVY (calculated) -0.77
Length 171 amino acids
Sequence (TAIR10)
(BLAST)
001: MGGKGGSGSG GGGKGGGGGG SGGGRGGGGG GGAKGGCGGG GKSGGGGGGG GYMVAPGSNR SSYISRDNFE SDPKGGSGGG GKGGGGGGGI SGGGAGGKSG
101: CGGGKSGGGG GGGKNGGGCG GGGGGKGGKS GGGSGGGGYM VAPGSNGSST ISRDKFESDT KGYFDNLHGK K
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)