AT2G30560.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.957 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : glycine-rich protein | ||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
glycine-rich protein; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot, carpel, cultured cell; EXPRESSED DURING: 4 anthesis; Has 188208 Blast hits to 49701 proteins in 2501 species: Archae - 445; Bacteria - 51994; Metazoa - 66635; Fungi - 12365; Plants - 18728; Viruses - 2697; Other Eukaryotes - 35344 (source: NCBI BLink). | ||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:13017347..13018857 | ||||||||||||||||
| Molecular Weight (calculated) | 14267.10 Da | ||||||||||||||||
| IEP (calculated) | 10.51 | ||||||||||||||||
| GRAVY (calculated) | -0.77 | ||||||||||||||||
| Length | 171 amino acids | ||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGGKGGSGSG GGGKGGGGGG SGGGRGGGGG GGAKGGCGGG GKSGGGGGGG GYMVAPGSNR SSYISRDNFE SDPKGGSGGG GKGGGGGGGI SGGGAGGKSG 101: CGGGKSGGGG GGGKNGGGCG GGGGGKGGKS GGGSGGGGYM VAPGSNGSST ISRDKFESDT KGYFDNLHGK K |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)