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AT2G30400.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 0.999
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : ovate family protein 2
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
ovate family protein 2 (OFP2); INVOLVED IN: N-terminal protein myristoylation; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF623 (InterPro:IPR006458); BEST Arabidopsis thaliana protein match is: ovate family protein 4 (TAIR:AT1G06920.1); Has 501 Blast hits to 493 proteins in 50 species: Archae - 0; Bacteria - 2; Metazoa - 28; Fungi - 6; Plants - 431; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink).
Protein Annotations
BioGrid:2940eggNOG:ENOG410IY1KeggNOG:ENOG410YV5MEMBL:AC002338EMBL:CP002685EMBL:U93215EnsemblPlants:AT2G30400
EnsemblPlants:AT2G30400.1entrez:817591GeneID:817591Genevisible:O04351GO:GO:0003677GO:GO:0005634GO:GO:0006351
GO:GO:0045892Gramene:AT2G30400.1hmmpanther:PTHR33057hmmpanther:PTHR33057:SF22HOGENOM:HOG000238410InParanoid:O04351IntAct:O04351
InterPro:IPR006458InterPro:IPR025830KEGG:ath:AT2G30400OMA:ENNIHASPaxDb:O04351Pfam:O04351Pfam:PF04844
Pfam:PF13724Pfscan:PS51754PhylomeDB:O04351PIR:A84708PRIDE:O04351PRO:PR:O04351PROSITE:PS51754
ProteinModelPortal:O04351Proteomes:UP000006548RefSeq:NP_180599.1STRING:3702.AT2G30400.1TAIR:AT2G30400tair10-symbols:ATOFP2tair10-symbols:OFP2
TIGRfam:TIGR01568TIGRFAMs:TIGR01568UniGene:At.38364UniProt:O04351
Coordinates (TAIR10) chr2:+:12956592..12957554
Molecular Weight (calculated) 36789.60 Da
IEP (calculated) 10.28
GRAVY (calculated) -0.93
Length 320 amino acids
Sequence (TAIR10)
(BLAST)
001: MGNYKFRISE MLPNAWFHKL KDVTKHSKPK NKASSSSSNT CSKKKPSSDS LPQHSYFSNS LVANNPPHHN SPRNSLHTKK MSKRKTLYKP SLKPLTPPPL
101: LVSASFNKSK INDQDSSYSL FPAIETSPES FVYSFYEEDD DDEFVEFSNF KINTKNKAFT KQKVKVIDSV EKACTASKPI KKPQKSHLSV KISRDEDDNE
201: YKAEKKYQRQ VSSGRKPSAG INLKRVNSPR IQLSGTRRST SRRSESKQDV LESFAVMKRS VDPKKDFRES MIEMIEENNI RASKDLEDLL ACYLTLNPKE
301: YHDLIIHVFE QIWLQLTKTK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)