AT2G30380.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 0.475 cytosol 0.469 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Plant protein of unknown function (DUF641) | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
CONTAINS InterPro DOMAIN/s: F-box associated interaction domain (InterPro:IPR017451), Protein of unknown function DUF641, plant (InterPro:IPR006943); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF641) (TAIR:AT2G45260.1); Has 527 Blast hits to 526 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 2; Plants - 518; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:12948284..12950573 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 59570.30 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.02 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.27 | ||||||||||||||||||||||||||||||||
| Length | 519 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MDNAVVKRSS PSSNISEVIS KFAKVCKFRS IGVFPDQKSN SNEILVDDKA KETEICDFNH KPSSMIQTFS WDDGEISKLF DIVSSLKLAY LEFQQAHLPY 101: DPDKIIEADN LVVSQLEALR RIKRLYLKTI QLNAKKTEIA ASCLDRLRYE IEVNEKHLEK LKAQVRAKES EIHSLIKKQE CLVAENRKLE NRIVSVSSFE 201: FAFRAASKSV HDFAKPLITL MKATDWNLEK AVESIVGNVT FAKTSDKKYA FESYIVRRMF HGIKLNPCDV TELMSFDDPL DALTAFSDSA FSRFCGQKYL 301: LVVHPSMEAS FFGNLDMRGL VLLGWVNVLN PCTGEFLRFP SGPNPVDTSR YDNHRVIEGA SWLAYYPGYW AMGFGKDKVN GTYKIVRMFY DTNQFEILDL 401: TIGEWRTMPN PLPYYVQPNH HSAFVNGSIY WYDLVTGYKI LALDLHTEQF RDVPRPHGSP TLAPLANLED RLAMICDYEP SHHWKVAIWT MDTQEETWTK 501: SLKLTKYVYS LDIFAPTIR |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)