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AT2G30140.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.997
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : UDP-Glycosyltransferase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
UDP-Glycosyltransferase superfamily protein; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G30150.1); Has 7945 Blast hits to 7893 proteins in 488 species: Archae - 0; Bacteria - 512; Metazoa - 2235; Fungi - 27; Plants - 5022; Viruses - 79; Other Eukaryotes - 70 (source: NCBI BLink).
Protein Annotations
eggNOG:COG1819eggNOG:KOG1192EMBL:KJ138888EnsemblPlants:AT2G30140EnsemblPlants:AT2G30140.1entrez:817566ExpressionAtlas:W8QNW8
GeneID:817566GO:GO:0016758Gramene:AT2G30140.1gramene_pathway:2.4.1.-gramene_pathway:2.4.1.203gramene_pathway:2.4.1.215gramene_pathway:PWY-2902
hmmpanther:PTHR11926hmmpanther:PTHR11926:SF176InterPro:IPR002213OMA:FMDRESEPANTHER:PTHR11926PaxDb:W8QNW8Pfam:O64733
Pfam:PF00201PhylomeDB:W8QNW8ProteinModelPortal:W8QNW8RefSeq:NP_180575.1SMR:W8QNW8STRING:3702.AT2G30140.1SUPFAM:SSF53756
UniGene:At.25004UniProt:O64733UniProt:W8QNW8
Coordinates (TAIR10) chr2:+:12872200..12873691
Molecular Weight (calculated) 51731.30 Da
IEP (calculated) 5.67
GRAVY (calculated) -0.16
Length 455 amino acids
Sequence (TAIR10)
(BLAST)
001: MDPNESPPNQ FRHVVAMPYP GRGHINPMMN LCKRLVRRYP NLHVTFVVTE EWLGFIGPDP KPDRIHFSTL PNLIPSELVR AKDFIGFIDA VYTRLEEPFE
101: KLLDSLNSPP PSVIFADTYV IWAVRVGRKR NIPVVSLWTM SATILSFFLH SDLLISHGHA LFEPSEEEVV DYVPGLSPTK LRDLPPIFDG YSDRVFKTAK
201: LCFDELPGAR SLLFTTAYEL EHKAIDAFTS KLDIPVYAIG PLIPFEELSV QNDNKEPNYI QWLEEQPEGS VLYISQGSFL SVSEAQMEEI VKGLRESGVR
301: FLWVARGGEL KLKEALEGSL GVVVSWCDQL RVLCHKAVGG FWTHCGFNST LEGIYSGVPM LAFPLFWDQI LNAKMIVEDW RVGMRIERTK KNELLIGREE
401: IKEVVKRFMD RESEEGKEMR RRACDLSEIS RGAVAKSGSS NVNIDEFVRH ITNTN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)