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AT2G30120.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G14750.1); Has 275 Blast hits to 241 proteins in 42 species: Archae - 4; Bacteria - 15; Metazoa - 15; Fungi - 4; Plants - 188; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink).
Protein Annotations
BioGrid:2913eggNOG:ENOG410IYDHeggNOG:ENOG410YI96EMBL:AC004165EMBL:AK221657EMBL:AY057695EMBL:AY116952
EMBL:CP002685EnsemblPlants:AT2G30120EnsemblPlants:AT2G30120.1EnsemblPlants:AT2G30120.2entrez:817564ExpressionAtlas:F4IMQ0GeneID:817564
Genevisible:F4IMQ0GO:GO:0005634GO:GO:0005737GO:GO:0006351GO:GO:0006355GO:GO:0009908GO:GO:0030154
hmmpanther:PTHR33405hmmpanther:PTHR33405:SF1HOGENOM:HOG000242815InParanoid:F4IMQ0IntAct:F4IMQ0KEGG:ath:AT2G30120ncoils:Coil
OMA:MEKTIDHPaxDb:F4IMQ0PIR:T00586PRO:PR:F4IMQ0ProteinModelPortal:F4IMQ0Proteomes:UP000006548RefSeq:NP_001154541.1
RefSeq:NP_565694.1SMR:F4IMQ0STRING:3702.AT2G30120.2TAIR:AT2G30120UniGene:At.19562UniProt:O64735
Coordinates (TAIR10) chr2:-:12861332..12861862
Molecular Weight (calculated) 19802.70 Da
IEP (calculated) 6.57
GRAVY (calculated) -0.54
Length 176 amino acids
Sequence (TAIR10)
(BLAST)
001: MAGRDRYIPS SAVSTSSSSR LLESQLIESD RNRARSVILE DRIAIQHREI QSLLNDNQRL AVAHIGLKDQ LNVAKRELER LLETAVKVKA EGEAKVREVY
101: QNALRMEAEA RVIDGLGAEL GQVRSDVQRL GSDRQELATE LAMFDDEMAK AKPNSDRAIE VKLEIEILRG EIRKGR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)