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AT2G29650.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 1.000
ASURE: plastid
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:20061580 (2010): plastid plastid envelope
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : phosphate transporter 4;1
Curator
Summary (TAIR10)
Encodes an inorganic phosphate transporter (PHT4;1) that is localized to the thylakoid membrane.
Computational
Description (TAIR10)
phosphate transporter 4;1 (PHT4;1); CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT4G00370.1); Has 36081 Blast hits to 35982 proteins in 2442 species: Archae - 467; Bacteria - 29522; Metazoa - 2463; Fungi - 1237; Plants - 437; Viruses - 0; Other Eukaryotes - 1955 (source: NCBI BLink).
Protein Annotations
BioGrid:2865BRENDA:3.6.3.27eggNOG:ENOG410XPWCeggNOG:KOG2532EMBL:AC005496EMBL:AY062564EMBL:AY114683
EMBL:BT001983EMBL:BT008489EMBL:BX820656EMBL:CP002685EnsemblPlants:AT2G29650EnsemblPlants:AT2G29650.1entrez:817515
GeneID:817515Genevisible:O82390GO:GO:0005315GO:GO:0006814GO:GO:0009416GO:GO:0009535GO:GO:0009579
GO:GO:0009624GO:GO:0015293GO:GO:0016021hmmpanther:PTHR11662hmmpanther:PTHR11662:SF312HOGENOM:HOG000230811InParanoid:O82390
InterPro:IPR011701InterPro:IPR020846KEGG:ath:AT2G29650OMA:HVNSPAMPaxDb:O82390Pfam:O82390Pfam:PF07690
Pfscan:PS50850PhylomeDB:O82390PIR:H84698PRIDE:O82390PRO:PR:O82390PROSITE:PS50850ProteinModelPortal:O82390
Proteomes:UP000006548RefSeq:NP_180526.1RefSeq:NP_850136.1RefSeq:NP_973561.1SABIO-RK:O82390STRING:3702.AT2G29650.1SUPFAM:SSF103473
TAIR:AT2G29650tair10-symbols:ANTR1tair10-symbols:PHT4;1TCDB:2.A.1.14.22TMHMM:TMhelixUniGene:At.46915UniProt:O82390
Coordinates (TAIR10) chr2:-:12673685..12676003
Molecular Weight (calculated) 56501.70 Da
IEP (calculated) 8.98
GRAVY (calculated) 0.28
Length 512 amino acids
Sequence (TAIR10)
(BLAST)
001: MNARALLCSS NIHSLYTSNR PPEKTSSSRS LRNLKPSPKS LRVWIYPRNR SSVFRVLVRS SDKSESSNSY YVEGDKVSGN NDVVSDSPSS IVLPWWEEFP
101: KRWVIVLLCF SAFLLCNMDR VNMSIAILPM SAEYGWNPAT VGLIQSSFFW GYLLTQIAGG IWADTVGGKR VLGFGVIWWS IATILTPVAA KLGLPYLLVV
201: RAFMGVGEGV AMPAMNNILS KWVPVQERSR SLALVYSGMY LGSVTGLAFS PFLIHQFGWP SVFYSFGSLG TVWLTLWLTK AESSPLEDPT LLPEERKLIA
301: DNCASKEPVK SIPWRLILSK PPVWALISCH FCHNWGTFIL LTWMPTYYHQ VLKFNLMESG LLSVFPWMTM AISANAGGWI ADTLVSRGFS VTNVRKIMQT
401: IGFLGPAFFL TQLKHIDSPT MAVLCMACSQ GTDAFSQSGL YSNHQDIAPR YSGVLLGLSN TAGVLAGVLG TAATGHILQH GSWDDVFTIS VGLYLVGTVI
501: WNLFSTGEKI ID
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)