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AT2G29620.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
endoplasmic reticulum 0.419
plasma membrane 0.378
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G07330.1); Has 887 Blast hits to 750 proteins in 151 species: Archae - 2; Bacteria - 63; Metazoa - 270; Fungi - 51; Plants - 111; Viruses - 6; Other Eukaryotes - 384 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JCK1eggNOG:ENOG4111CGREMBL:AC005496EMBL:CP002685EnsemblPlants:AT2G29620EnsemblPlants:AT2G29620.1entrez:817512
GeneID:817512GO:GO:0016021Gramene:AT2G29620.1hmmpanther:PTHR33870HOGENOM:HOG000115170KEGG:ath:AT2G29620ncoils:Coil
OMA:MEVPRICPhylomeDB:O82393PIR:E84698Proteomes:UP000006548RefSeq:NP_180523.1TAIR:AT2G29620TMHMM:TMhelix
UniGene:At.38456UniProt:O82393
Coordinates (TAIR10) chr2:-:12663200..12665803
Molecular Weight (calculated) 85161.70 Da
IEP (calculated) 4.36
GRAVY (calculated) -0.86
Length 747 amino acids
Sequence (TAIR10)
(BLAST)
001: MGKFDAKDVC FIVWKILRFS TKTIFRYVKR YPIVSGVSTF LIILYTFLPW VFYFLLCSSP LIAFASFYIR NHDLSSKICD EDKRKDRGLS TISQEGRTEK
101: AKLKHQQSVR RNARRKVEEV GKDWDSSQAS EDERGKVILT TLYGEVLPET ITPDMEKFKR ERTLLVAEEN VFDSVLDNHR DLVELERLIS VDGDDESEVE
201: CSSSSSSEGE KEEEERREDV SKVVVAWTED DQKNLMDLGT SEIERNKRLE NLISRRRSRR FFLLAAEGSL MDDMEVPRIC IGRNFYGFDK GNYEIDGLVM
301: PGSAPSVLLP RRNPFDLPYD PLEEKPNLTG DSFQQEFAET NPKDIFFCRH ESFHHRAFPS ESQNDSKFTS LWRNVVDGRP RPLQGSNNQE PLMKEREKGN
401: DMEAGEVRIE TDSIRNDDSD SNASLSPRER EKDFNVSDQS DASGTFCKRN DRVGNSVAGL VPRSSGSSSL ATARQRYMEH FGYNTRKCHM VTHSVDSDLQ
501: VEVSELGSPP TSVDGNDSDY ERSLFVYESE MGKEMGYNGV ESEVLLVGKD DQDQNETTSL ASPENEEARN LEPTVPQSDS AFFKRDEELK ELSENSADEI
601: KISYDSDEHE PSERTTDQEF EEPYERNDGE ERQQLVEAEA SDVNHHGNSE ESVTSPRSVL PDMLHLDQTA WEVLDHASNG QLQNVDPPAE SSHYQLDGRI
701: YATGTIQENQ EGFEVTFNDE SNSAEDHRQS IDPLAVELEN NQTDGIN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)