AT2G29620.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.946 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G07330.1); Has 887 Blast hits to 750 proteins in 151 species: Archae - 2; Bacteria - 63; Metazoa - 270; Fungi - 51; Plants - 111; Viruses - 6; Other Eukaryotes - 384 (source: NCBI BLink). | ||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:12663200..12665803 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 85161.70 Da | ||||||||||||||||||||||||
| IEP (calculated) | 4.36 | ||||||||||||||||||||||||
| GRAVY (calculated) | -0.86 | ||||||||||||||||||||||||
| Length | 747 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGKFDAKDVC FIVWKILRFS TKTIFRYVKR YPIVSGVSTF LIILYTFLPW VFYFLLCSSP LIAFASFYIR NHDLSSKICD EDKRKDRGLS TISQEGRTEK 101: AKLKHQQSVR RNARRKVEEV GKDWDSSQAS EDERGKVILT TLYGEVLPET ITPDMEKFKR ERTLLVAEEN VFDSVLDNHR DLVELERLIS VDGDDESEVE 201: CSSSSSSEGE KEEEERREDV SKVVVAWTED DQKNLMDLGT SEIERNKRLE NLISRRRSRR FFLLAAEGSL MDDMEVPRIC IGRNFYGFDK GNYEIDGLVM 301: PGSAPSVLLP RRNPFDLPYD PLEEKPNLTG DSFQQEFAET NPKDIFFCRH ESFHHRAFPS ESQNDSKFTS LWRNVVDGRP RPLQGSNNQE PLMKEREKGN 401: DMEAGEVRIE TDSIRNDDSD SNASLSPRER EKDFNVSDQS DASGTFCKRN DRVGNSVAGL VPRSSGSSSL ATARQRYMEH FGYNTRKCHM VTHSVDSDLQ 501: VEVSELGSPP TSVDGNDSDY ERSLFVYESE MGKEMGYNGV ESEVLLVGKD DQDQNETTSL ASPENEEARN LEPTVPQSDS AFFKRDEELK ELSENSADEI 601: KISYDSDEHE PSERTTDQEF EEPYERNDGE ERQQLVEAEA SDVNHHGNSE ESVTSPRSVL PDMLHLDQTA WEVLDHASNG QLQNVDPPAE SSHYQLDGRI 701: YATGTIQENQ EGFEVTFNDE SNSAEDHRQS IDPLAVELEN NQTDGIN |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)