suba logo
AT2G29590.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
peroxisome 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Thioesterase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Thioesterase superfamily protein; CONTAINS InterPro DOMAIN/s: Thioesterase superfamily (InterPro:IPR006683); BEST Arabidopsis thaliana protein match is: Thioesterase superfamily protein (TAIR:AT1G04290.1); Has 283 Blast hits to 282 proteins in 58 species: Archae - 0; Bacteria - 0; Metazoa - 92; Fungi - 21; Plants - 166; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Protein Annotations
eggNOG:COG2050eggNOG:KOG3328EMBL:AC004561EMBL:AK117981
EMBL:BT003678EMBL:CP002685EnsemblPlants:AT2G29590EnsemblPlants:AT2G29590.1
entrez:817508Gene3D:3.10.129.10GeneID:817508GO:GO:0005777
Gramene:AT2G29590.1hmmpanther:PTHR21660hmmpanther:PTHR21660:SF8HOGENOM:HOG000170540
InterPro:IPR006683InterPro:IPR029069KEGG:ath:AT2G29590OMA:DMSISYL
Pfam:PF03061PhylomeDB:Q9ZW37Proteomes:UP000006548Reactome:R-ATH-75105
RefSeq:NP_565683.1SMR:Q9ZW37STRING:3702.AT2G29590.1SUPFAM:SSF54637
TAIR:AT2G29590UniGene:At.43928UniGene:At.48529UniProt:Q9ZW37
Coordinates (TAIR10) chr2:-:12654602..12655432
Molecular Weight (calculated) 17369.00 Da
IEP (calculated) 5.08
GRAVY (calculated) -0.13
Length 158 amino acids
Sequence (TAIR10)
(BLAST)
001: MMEKIMEYLQ LSDEVVDDGE APRVEEFLGE GKSFYENFSL RGIRVNRVEP GFISCSFKVP LRLTDRDKNL ANGAIANLVD EVGGALVHGE GLPMSVSVDM
101: SIAFLSKAKL GEELEITSRL LGERGGYKGT IVVVRNKMTG EIIAEGRHSM FGRQASKL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)