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AT2G29490.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.998
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : glutathione S-transferase TAU 1
Curator
Summary (TAIR10)
Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).
Computational
Description (TAIR10)
glutathione S-transferase TAU 1 (GSTU1); CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase tau 2 (TAIR:AT2G29480.1); Has 9031 Blast hits to 9013 proteins in 1259 species: Archae - 0; Bacteria - 4823; Metazoa - 1003; Fungi - 192; Plants - 2095; Viruses - 0; Other Eukaryotes - 918 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G29490-MONOMERBioGrid:2848EC:2.5.1.18eggNOG:ENOG410XSIXeggNOG:KOG0406EMBL:AC004561EMBL:AF288183
EMBL:AF428387EMBL:BT010162EMBL:CP002685EnsemblPlants:AT2G29490EnsemblPlants:AT2G29490.1entrez:817498Gene3D:1.20.1050.10
Gene3D:3.40.30.10GeneID:817498Genevisible:Q9ZW30GO:GO:0004364GO:GO:0005737GO:GO:0005829GO:GO:0006749
GO:GO:0009407GO:GO:0009636Gramene:AT2G29490.1hmmpanther:PTHR11260hmmpanther:PTHR11260:SF303HOGENOM:HOG000125749InParanoid:Q9ZW30
IntAct:Q9ZW30InterPro:IPR004045InterPro:IPR010987InterPro:IPR012336KEGG:ath:AT2G29490KO:K00799OMA:DMIAGSM
PaxDb:Q9ZW30Pfam:PF02798Pfam:PF13410Pfam:PF13417Pfam:Q9ZW30Pfscan:PS50404Pfscan:PS50405
PhylomeDB:Q9ZW30PIR:A84697PRIDE:Q9ZW30PRO:PR:Q9ZW30PROSITE:PS50404PROSITE:PS50405ProteinModelPortal:Q9ZW30
Proteomes:UP000006548RefSeq:NP_180510.1SMR:Q9ZW30STRING:3702.AT2G29490.1SUPFAM:SSF47616SUPFAM:SSF52833TAIR:AT2G29490
tair10-symbols:ATGSTU1tair10-symbols:GST19tair10-symbols:GSTU1UniGene:At.20874UniProt:Q9ZW30
Coordinates (TAIR10) chr2:-:12631593..12632360
Molecular Weight (calculated) 25915.90 Da
IEP (calculated) 5.86
GRAVY (calculated) -0.21
Length 224 amino acids
Sequence (TAIR10)
(BLAST)
001: MAEKEESVKL LGFWASPFSR RVEMALKLKG VPYEYLEEDL PNKTPLLLEL NPLHKKVPVL VHNDKILLES HLILEYIDQT WKNSPILPQD PYEKAMARFW
101: AKFIDDQILT LGFRSLVKAE KGREVAIEET RELLMFLEKE VTGKDFFGGK TIGFLDMIAG SMIPFCLARL WKGIGIDMIP EEKFPELNRW IKNLEEVEAV
201: RGCIPPREKQ IERMTKIAET IKSA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)