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AT2G29460.1
Subcellular Consensus
(Prediction and Experimental)

min: heatmap :max

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SUBAcon:
cytosol 0.993
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : glutathione S-transferase tau 4
Curator
Summary (TAIR10)
Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).
Computational
Description (TAIR10)
glutathione S-transferase tau 4 (GSTU4); CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase TAU 1 (TAIR:AT2G29490.1); Has 7749 Blast hits to 7727 proteins in 1195 species: Archae - 0; Bacteria - 3946; Metazoa - 909; Fungi - 184; Plants - 2019; Viruses - 0; Other Eukaryotes - 691 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G29460-MONOMEREC:2.5.1.18eggNOG:ENOG410XSIXeggNOG:KOG0406EMBL:AC004561EMBL:AF288186EMBL:AF387004
EMBL:BT003399EMBL:CP002685EnsemblPlants:AT2G29460EnsemblPlants:AT2G29460.1entrez:817495Gene3D:1.20.1050.10Gene3D:3.40.30.10
GeneID:817495Genevisible:Q9ZW27GO:GO:0004364GO:GO:0005737GO:GO:0005829GO:GO:0006749GO:GO:0009407
GO:GO:0009636Gramene:AT2G29460.1hmmpanther:PTHR11260hmmpanther:PTHR11260:SF303HOGENOM:HOG000125749InParanoid:Q9ZW27InterPro:IPR004045
InterPro:IPR010987InterPro:IPR012336iPTMnet:Q9ZW27KEGG:ath:AT2G29460KO:K00799OMA:EYLEQDIPaxDb:Q9ZW27
Pfam:PF13410Pfam:PF13417Pfam:Q9ZW27Pfscan:PS50404Pfscan:PS50405PhylomeDB:Q9ZW27PIR:F84696
PRIDE:Q9ZW27PRO:PR:Q9ZW27PROSITE:PS50404PROSITE:PS50405ProteinModelPortal:Q9ZW27Proteomes:UP000006548RefSeq:NP_180507.1
SMR:Q9ZW27STRING:3702.AT2G29460.1SUPFAM:SSF47616SUPFAM:SSF52833TAIR:AT2G29460tair10-symbols:ATGSTU4tair10-symbols:GST22
tair10-symbols:GSTU4UniGene:At.12688UniGene:At.67637UniGene:At.68148UniProt:Q9ZW27
Coordinates (TAIR10) chr2:-:12626689..12627600
Molecular Weight (calculated) 25840.80 Da
IEP (calculated) 5.26
GRAVY (calculated) -0.12
Length 224 amino acids
Sequence (TAIR10)
(BLAST)
001: MAEKEEDVKL LGFWASPFTR RVEMAFKLKG VPYEYLEQDI VNKSPLLLQI NPVYKKVPVL VYKGKILSES HVILEYIDQI WKNNPILPQD PYEKAMALFW
101: AKFVDEQVGP VAFMSVAKAE KGVEVAIKEA QELFMFLEKE VTGKDFFGGK TIGFLDLVAG SMIPFCLARG WEGMGIDMIP EEKFPELNRW IKNLKEIEIV
201: RECIPPREEQ IEHMKKVVER IKSA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)