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AT2G29320.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
mitochondrion 0.978
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : NAD(P)-binding Rossmann-fold superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G29300.1); Has 115907 Blast hits to 115692 proteins in 3517 species: Archae - 975; Bacteria - 76352; Metazoa - 4750; Fungi - 5727; Plants - 2476; Viruses - 5; Other Eukaryotes - 25622 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G29320-MONOMEREC:1.1.1.-eggNOG:COG1028eggNOG:KOG0725EMBL:AC004561EMBL:AY052242EMBL:BT001027
EMBL:CP002685EnsemblPlants:AT2G29320EnsemblPlants:AT2G29320.1entrez:817481Gene3D:3.40.50.720GeneID:817481Genevisible:Q9ZW15
GO:GO:0016491Gramene:AT2G29320.1hmmpanther:PTHR24322hmmpanther:PTHR24322:SF623IntAct:Q9ZW15InterPro:IPR002347InterPro:IPR016040
KEGG:ath:AT2G29320KO:K08081OMA:EMTDERWPANTHER:PTHR24322PaxDb:Q9ZW15Pfam:PF00106Pfam:Q9ZW15
PhylomeDB:Q9ZW15PIR:H84694PRIDE:Q9ZW15PRINTS:PR00080PRINTS:PR00081PRO:PR:Q9ZW15ProteinModelPortal:Q9ZW15
Proteomes:UP000006548RefSeq:NP_180493.1SMR:Q9ZW15STRING:3702.AT2G29320.1SUPFAM:SSF51735TAIR:AT2G29320UniGene:At.26424
UniProt:Q9ZW15
Coordinates (TAIR10) chr2:+:12592180..12593377
Molecular Weight (calculated) 28778.60 Da
IEP (calculated) 7.07
GRAVY (calculated) 0.14
Length 269 amino acids
Sequence (TAIR10)
(BLAST)
001: MVTRKMDKRL WSLQGMTALV TGAASGIGYA IVEELAGFGA KIHICDISKT LLNQSLSEWE NKGFQVSGSV CDVTSHPERE KLMQTVSSIF DGKLNILVNN
101: VGVLRGKPTT EYVADDFTFH ISTNLEAAYH FCQLSHPLLK ASGYGSIVFL SSVAGVVSLI DCGSIYGLTK GALNQLARNL ACEWAKDGIR ANAVAPNVVK
201: TAQSQSFLED VSKKEGLLSR TPLGRVGEPN EVSSLVVFLC LPAASYITGQ TICVDGGLTV NGFSYQPHA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)