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AT2G28890.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 0.922
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : poltergeist like 4
Curator
Summary (TAIR10)
Encodes a protein phosphatase 2C like gene, similar to POL. Involved in leaf development. Knockout mutants have abnormally shaped leaves.
Computational
Description (TAIR10)
poltergeist like 4 (PLL4); FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: N-terminal protein myristoylation, leaf development; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: pol-like 5 (TAIR:AT1G07630.1); Has 2844 Blast hits to 2809 proteins in 262 species: Archae - 0; Bacteria - 50; Metazoa - 567; Fungi - 230; Plants - 1630; Viruses - 0; Other Eukaryotes - 367 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G28890-MONOMEREC:3.1.3.16eggNOG:COG0631eggNOG:KOG0700EMBL:AC005727EMBL:AY065299EMBL:AY096450
EMBL:CP002685EnsemblPlants:AT2G28890EnsemblPlants:AT2G28890.1entrez:817438Gene3D:3.60.40.10GeneID:817438Genevisible:Q9ZV25
GO:GO:0004722GO:GO:0005634GO:GO:0005886GO:GO:0046872GO:GO:0048366Gramene:AT2G28890.1hmmpanther:PTHR13832
hmmpanther:PTHR13832:SF351HOGENOM:HOG000239375InParanoid:Q9ZV25InterPro:IPR001932InterPro:IPR015655iPTMnet:Q9ZV25KEGG:ath:AT2G28890
OMA:ARTEKFQPANTHER:PTHR13832PaxDb:Q9ZV25Pfam:PF00481Pfam:Q9ZV25Pfscan:PS51746PhylomeDB:Q9ZV25
PIR:B84690PRIDE:Q9ZV25PRO:PR:Q9ZV25PROSITE:PS51746ProteinModelPortal:Q9ZV25Proteomes:UP000006548RefSeq:NP_180455.1
SMART:SM00332SMR:Q9ZV25STRING:3702.AT2G28890.1SUPFAM:SSF81606TAIR:AT2G28890tair10-symbols:PLL4UniGene:At.27597
UniProt:Q9ZV25
Coordinates (TAIR10) chr2:-:12405799..12408062
Molecular Weight (calculated) 72486.00 Da
IEP (calculated) 4.90
GRAVY (calculated) -0.53
Length 654 amino acids
Sequence (TAIR10)
(BLAST)
001: MGNGIGKLSK CLTGGAGRNK KPELSILEPD PLDEGLGHSF CYVRPDPTRV SSSKVHSEEE TTTFRTISGA SVSANTATPL STSLYDPYGH IDRAAAFEST
101: TSFSSIPLQP IPRSSGPIVP GSGPLERGFL SGPIERGFMS GPLDGSSGPI DGKTGSDQFQ RSFSHGLANL RVGSRKGSLV RVLRRAISKT ITRGQNSIVA
201: PIKPVKEPDW VFGSDKTRIH QIENNLTVNS LNFSSEGSLL DDDVSLESQN LQWAQGKAGE DRVHVVVSEE HGWLFVGIYD GFNGPDAPDY LLSHLYPAVH
301: RELKGLLWDD PKTDAKSSDE ADVENRDSSS EKKSKNWEES QRRWRCEWDR DLDRLLKDRS NGLDLDPDPN SSDVLKALSQ ALRKTEEAYL ENADMMLDEN
401: PELALMGSCV LVMLMKGEDV YLMNVGDSRA VLGQKAESDY WIGKIKQDLE RINEETMNDF DGCGDGEGAS LVPTLSAFQL TVDHSTNVEE EVNRIRKEHP
501: DDASAVSNER VKGSLKVTRA FGAGFLKQPK WNNALLEMFQ IDYKGTSPYI NCLPSLYHHR LGSKDQFLIL SSDGLYQYFT NEEAVSEVEL FITLQPEGDP
601: AQHLVQELLF RAAKKAGMDF HELLEIPQGE RRRYHDDVSI VVISLEGRMW KSCV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)