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AT2G28800.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 1.000
ASURE: plastid
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : 63 kDa inner membrane family protein
Curator
Summary (TAIR10)
member of Chloroplast membrane protein ALBINO3 family. Similar to pea PPF1 and may play a role in plant senescence.
Computational
Description (TAIR10)
ALBINO 3 (ALB3); FUNCTIONS IN: P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: protein import into chloroplast thylakoid membrane, thylakoid membrane organization, regulation of cell aging; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Membrane insertion protein, OxaA/YidC (InterPro:IPR001708), Membrane insertion protein, OxaA/YidC, core (InterPro:IPR020001); BEST Arabidopsis thaliana protein match is: OxaA/YidC-like membrane insertion protein (TAIR:AT1G24490.1); Has 8837 Blast hits to 8795 proteins in 2578 species: Archae - 0; Bacteria - 5819; Metazoa - 151; Fungi - 71; Plants - 148; Viruses - 0; Other Eukaryotes - 2648 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G28800-MONOMERBioCyc:MetaCyc:AT2G28800-MONOMERBioGrid:2779DisProt:DP00662eggNOG:COG0706eggNOG:KOG1239EMBL:AC005727
EMBL:AY087081EMBL:BT002436EMBL:BT006602EMBL:CP002685EMBL:U89272EnsemblPlants:AT2G28800EnsemblPlants:AT2G28800.1
entrez:817429ExpressionAtlas:Q8LBP4GeneID:817429Genevisible:Q8LBP4GO:GO:0009507GO:GO:0009534GO:GO:0009535
GO:GO:0010027GO:GO:0016021GO:GO:0045038GO:GO:0051205GO:GO:0090342hmmpanther:PTHR12428hmmpanther:PTHR12428:SF19
HOGENOM:HOG000240550InParanoid:Q8LBP4IntAct:Q8LBP4InterPro:IPR001708InterPro:IPR028055iPTMnet:Q8LBP4MINT:MINT-7992824
OMA:HRTRLVAPANTHER:PTHR12428PaxDb:Q8LBP4PDB:5E4WPDBsum:5E4WPfam:PF02096Pfam:Q8LBP4
PhylomeDB:Q8LBP4PIR:A84689PRIDE:Q8LBP4PRO:PR:Q8LBP4ProteinModelPortal:Q8LBP4Proteomes:UP000006548RefSeq:NP_180446.1
RefSeq:NP_850125.1SMR:Q8LBP4STRING:3702.AT2G28800.1TAIR:AT2G28800tair10-symbols:ALB3TCDB:2.A.9.2.1TIGRfam:TIGR03592
TIGRFAMs:TIGR03592TMHMM:TMhelixUniGene:At.10324UniProt:Q8LBP4
Coordinates (TAIR10) chr2:-:12356669..12359158
Molecular Weight (calculated) 50248.20 Da
IEP (calculated) 9.51
GRAVY (calculated) -0.13
Length 462 amino acids
Sequence (TAIR10)
(BLAST)
001: MARVLVSSPS SFFGSPLIKP SSSLRHSGVG GGGTAQFLPY RSNNNKLFTT STTVRFSLNE IPPFHGLDSS VDIGAIFTRA ESLLYTIADA AVVGADSVVT
101: TDSSAVQKSG GWFGFISDAM ELVLKILKDG LSAVHVPYAY GFAIILLTII VKAATYPLTK QQVESTLAMQ NLQPKIKAIQ QRYAGNQERI QLETSRLYKQ
201: AGVNPLAGCL PTLATIPVWI GLYQALSNVA NEGLFTEGFF WIPSLGGPTS IAARQSGSGI SWLFPFVDGH PPLGWYDTVA YLVLPVLLIA SQYVSMEIMK
301: PPQTDDPAQK NTLLVFKFLP LMIGYFALSV PSGLSIYWLT NNVLSTAQQV YLRKLGGAKP NMDENASKII SAGRAKRSIA QPDDAGERFR QLKEQEKRSK
401: KNKAVAKDTV ELVEESQSES EEGSDDEEEE AREGALASST TSKPLPEVGQ RRSKRSKRKR TV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)