suba logo
AT2G28590.1
Subcellular Consensus
(Prediction and Experimental)

min: heatmap :max

.
SUBAcon:
cytosol 0.984
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein kinase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G07870.2); Has 113767 Blast hits to 112590 proteins in 4096 species: Archae - 105; Bacteria - 13217; Metazoa - 41619; Fungi - 9472; Plants - 32535; Viruses - 378; Other Eukaryotes - 16441 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G28590-MONOMEReggNOG:COG0515eggNOG:KOG1187EMBL:AC006587EMBL:AC007171EMBL:BT029736EMBL:CP002685
EnsemblPlants:AT2G28590EnsemblPlants:AT2G28590.1entrez:817407Gene3D:2.60.120.200GeneID:817407GO:GO:0004674GO:GO:0005524
Gramene:AT2G28590.1hmmpanther:PTHR27001hmmpanther:PTHR27001:SF63HOGENOM:HOG000116550InterPro:IPR000719InterPro:IPR008271InterPro:IPR011009
InterPro:IPR013320InterPro:IPR017441KEGG:ath:AT2G28590OMA:VMALDHLPfam:PF00069Pfscan:PS50011PhylomeDB:Q9SIB6
PIR:G84686PROSITE:PS00107PROSITE:PS00108PROSITE:PS50011Proteomes:UP000006548Reactome:R-ATH-450302Reactome:R-ATH-450321
RefSeq:NP_180426.1scanprosite:PS00107scanprosite:PS00108SMART:SM00220SMR:Q9SIB6STRING:3702.AT2G28590.1SUPFAM:SSF56112
TAIR:AT2G28590UniGene:At.43688UniProt:Q9SIB6
Coordinates (TAIR10) chr2:+:12249835..12251490
Molecular Weight (calculated) 47281.60 Da
IEP (calculated) 7.91
GRAVY (calculated) -0.40
Length 424 amino acids
Sequence (TAIR10)
(BLAST)
001: MGCFGRTPKS NKRSDTKTTK NNDFTPKKLT VNANRDKLTQ PSSDCLKVSI CGDVSKEIVT KKDQLALDAK DTNVEDEVIV KKAQTFTFEE LSVSTGNFKS
101: DCFLGEGGFG KVYKGFIEKI NQVVAIKQLD RNGAQGIREF VVEVLTLSLA DHPNLVKLIG FCAEGVQRLL VYEYMPLGSL DNHLHDLPSG KNPLAWNTRM
201: KIAAGAARGL EYLHDTMKPP VIYRDLKCSN ILIDEGYHAK LSDFGLAKVG PRGSETHVST RVMGTYGYCA PDYALTGQLT FKSDVYSFGV VLLELITGRK
301: AYDNTRTRNH QSLVEWANPL FKDRKNFKKM VDPLLEGDYP VRGLYQALAI AAMCVQEQPS MRPVIADVVM ALDHLASSKY DRSHRQKQDN VTETKVDEEK
401: TLTTESNVCV EEKQEIKICS DQAT
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)