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AT2G28570.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 0.784
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; Has 13 Blast hits to 13 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 13; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JU0EeggNOG:ENOG41107BYEMBL:AC006587EMBL:BT024800
EMBL:CP002685EnsemblPlants:AT2G28570EnsemblPlants:AT2G28570.1entrez:817405
GeneID:817405Gramene:AT2G28570.1hmmpanther:PTHR37721HOGENOM:HOG000153499
KEGG:ath:AT2G28570OMA:YNSEANSPIR:E84686Proteomes:UP000006548
RefSeq:NP_565675.1TAIR:AT2G28570UniGene:At.38604UniProt:Q9SK01
Coordinates (TAIR10) chr2:+:12242064..12242300
Molecular Weight (calculated) 7909.12 Da
IEP (calculated) 11.27
GRAVY (calculated) -0.69
Length 78 amino acids
Sequence (TAIR10)
(BLAST)
1: MESVKTKSST ARSVELPPRR GKVKREIFGF LANSIVSAAV KAGGSFRRNG GGGGGGSSSS TTTPPGSGYT SDQNNEST
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)