AT2G28180.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:vacuole 0.547 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Cation/hydrogen exchanger family protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
member of Putative Na+/H+ antiporter family | ||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
ATCHX8; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger (InterPro:IPR006153); BEST Arabidopsis thaliana protein match is: cation/H+ exchanger 6A (TAIR:AT1G08140.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:12010994..12013832 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 93701.70 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.20 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.37 | ||||||||||||||||||||||||||||||||||||||||
| Length | 847 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEMGNGTGPG MSGAFSGGGN EILGMGGGGG IMGGGDISHM SPEVKWIFEM AWYGETVRYD GLICEEHPPK LSSDGIWEKL IIKSAGLYFW QYRLPKLEIV 101: ILLVFFLWQG FNILFKKLGL SIPKLSSMML AGLLLNVLVT LSGENSIIAD ILVTKNRIDV AGCLGSFGFL IFWFLKGVRM DVKRIFKAEA KARVTGVAAV 201: TFPIVVGFLL FNLKSAKNRP LTFQEYDVML LMESITSFSG IARLLRDLGM NHSSIGRVAL SSALVSDIVG LLLLIANVSR SSATLADGLA ILTEITLFLV 301: IAFAVVRPIM FKIIKRKGEG RPIEDKYIHG VLVLVCLSCM YWEDLSQFPP LGAFFLGLAI PNGPPIGSAL VERLESFNFG IILPLFLTAV MLRTDTTAWK 401: GALTFFSGDD KKFAVASLVL LIFLLKLSVS VIVPYLYKMP LRDSIILALI MSHKGIIELS FYLFSLSLKL VTKDTFSILV LSIVLNSLLI PMAIGFLYDP 501: SKQFICYQKR NLASMKNMGE LKTLVCIHRP DHISSMINLL EASYQSEDSP LTCYVLHLVE LRGQDVPTLI SHKVQKLGVG AGNKYSENVI LSFEHFHRSV 601: CSSISIDTFT CIANANHMQD DICWLALDKA VTLIILPFHR TWSLDRTSIV SDVEAIRFLN VNVLKQAPCS VGILIERHLV NKKQEPHESL KVCVIFVGGK 701: DDREALAFAK RMARQENVTL TVLRLLASGK SKDATGWDQM LDTVELRELI KSNNAGMVKE ETSTIYLEQE ILDGADTSML LRSMAFDYDL FVVGRTCGEN 801: HEATKGIENW CEFEELGVIG DFLASPDFPS KTSVLVVQQQ RTVANNN |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)