AT2G28080.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.984 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : UDP-Glycosyltransferase superfamily protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G36970.1); Has 5722 Blast hits to 5664 proteins in 294 species: Archae - 0; Bacteria - 48; Metazoa - 520; Fungi - 23; Plants - 5076; Viruses - 28; Other Eukaryotes - 27 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:11960774..11963227 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 53369.70 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.19 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.03 | ||||||||||||||||||||||||||||||||||||
| Length | 482 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MADVRNPTKN HHGHHHLHAL LIPYPFQGHV NPFVHLAIKL ASQGITVTFV NTHYIHHQIT NGSDGDIFAG VRSESGLDIR YATVSDGLPV GFDRSLNHDT 101: YQSSLLHVFY AHVEELVASL VGGDGGVNVM IADTFFVWPS VVARKFGLVC VSFWTEAALV FSLYYHMDLL RIHGHFGAQE TRSDLIDYIP GVAAINPKDT 201: ASYLQETDTS SVVHQIIFKA FEDVKKVDFV LCNTIQQFED KTIKALNTKI PFYAIGPIIP FNNQTGSVTT SLWSESDCTQ WLNTKPKSSV LYISFGSYAH 301: VTKKDLVEIA HGILLSKVNF VWVVRPDIVS SDETNPLPEG FETEAGDRGI VIPWCCQMTV LSHESVGGFL THCGWNSILE TIWCEVPVLC FPLLTDQVTN 401: RKLVVDDWEI GINLCEDKSD FGRDEVGRNI NRLMCGVSKE KIGRVKMSLE GAVRNSGSSS EMNLGLFIDG LLSKVGLSNG KA |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)