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AT2G28030.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 0.423
extracellular 0.387
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Eukaryotic aspartyl protease family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT2G28010.1); Has 3133 Blast hits to 3123 proteins in 279 species: Archae - 0; Bacteria - 0; Metazoa - 737; Fungi - 528; Plants - 1715; Viruses - 0; Other Eukaryotes - 153 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G28030-MONOMEReggNOG:ENOG410XNV7eggNOG:KOG1339EMBL:AC005851EMBL:AC006929EMBL:CP002685EnsemblPlants:AT2G28030
EnsemblPlants:AT2G28030.1entrez:817347Gene3D:2.40.70.10GeneID:817347GO:GO:0004190Gramene:AT2G28030.1hmmpanther:PTHR13683
hmmpanther:PTHR13683:SF298InterPro:IPR001461InterPro:IPR001969InterPro:IPR021109InterPro:IPR032799InterPro:IPR032861InterPro:IPR033121
KEGG:ath:AT2G28030MEROPS:A01.A19OMA:GTFCLAIPANTHER:PTHR13683Pfam:PF14541Pfam:PF14543Pfscan:PS51767
PhylomeDB:Q9ZUU5PIR:H84679PROSITE:PS00141PROSITE:PS51767Proteomes:UP000006548RefSeq:NP_180370.1scanprosite:PS00141
SMR:Q9ZUU5STRING:3702.AT2G28030.1SUPFAM:SSF50630TAIR:AT2G28030UniGene:At.62392UniProt:Q9ZUU5
Coordinates (TAIR10) chr2:-:11934208..11935386
Molecular Weight (calculated) 42861.70 Da
IEP (calculated) 4.62
GRAVY (calculated) 0.02
Length 392 amino acids
Sequence (TAIR10)
(BLAST)
001: MIVLFLQIIT CSLFTTTASS PHGFTIDLIQ RRSNSSSSRL SKNQLQGASP YADTLFDYNI YLMKLQVGTP PFEIEAEIDT GSDLIWTQCM PCTNCYSQYA
101: PIFDPSNSST FKEKRCNGNS CHYKIIYADT TYSKGTLATE TVTIHSTSGE PFVMPETTIG CGHNSSWFKP TFSGMVGLSW GPSSLITQMG GEYPGLMSYC
201: FASQGTSKIN FGTNAIVAGD GVVSTTMFLT TAKPGLYYLN LDAVSVGDTH VETMGTTFHA LEGNIIIDSG TTLTYFPVSY CNLVREAVDH YVTAVRTADP
301: TGNDMLCYYT DTIDIFPVIT MHFSGGADLV LDKYNMYIET ITRGTFCLAI ICNNPPQDAI FGNRAQNNFL VGYDSSSLLV SFSPTNCSAL WN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)