AT2G27700.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 1.000 ASURE: cytosol What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : eukaryotic translation initiation factor 2 family protein / eIF-2 family protein | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
eukaryotic translation initiation factor 2 family protein / eIF-2 family protein; FUNCTIONS IN: translation factor activity, nucleic acid binding, GTP binding, GTPase activity; CONTAINS InterPro DOMAIN/s: Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation initiation factor 2 related (InterPro:IPR015760), Protein synthesis factor, GTP-binding (InterPro:IPR000795); BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 2 (eIF-2) family protein (TAIR:AT1G76810.1); Has 37855 Blast hits to 37850 proteins in 3461 species: Archae - 582; Bacteria - 27356; Metazoa - 762; Fungi - 739; Plants - 548; Viruses - 1; Other Eukaryotes - 7867 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:11813949..11816002 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 53334.20 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.10 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.06 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 479 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MDLKKPSARG GDDKQQIVGD EHSRRNKLSE EDKVRSPICC MMGHIDTGKT KLLDYITGNV QEGEAGGTTQ KMGATYLSAR NILEKTMELK SDTKLKVPRP 101: LFIDTPGYEF YTNLRSRGLG LCDFAILVVD IMHGLEPQTI ECLNLLRMKN TEFIIALNKV DRLYGWRICE NAPILEAMKQ QTKDVINEFN MRLNEIINQF 201: KEQGLNSELY YKNKEMGETF SIVPTCAISG EGIPDLLLLL VQLTQKTMVE KLITYVDKVQ CTVLEVKVME GYGTTIDVVL VNGELHEGGQ IVVCGLQGPI 301: VTTIRALLTP HPIKELHVNG NHVHHEVIKA AECINIIAKD LEHVIVGTAL HVVGPDDDIE AIKELVMEDV NSVLSRIDKS GEGVYIQAST LGSLEALLEF 401: LKSPAVKLPV GGIGIGPVQK KDVMKAGVML ERKKEFATIL ALDVEVTTEA RELADEMEVK IFCSDIMYHL FDQYQAYIC |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)