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AT2G27420.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
extracellular 0.726
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Cysteine proteinases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Cysteine proteinases superfamily protein; FUNCTIONS IN: cysteine-type peptidase activity, cysteine-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C1A, papain (InterPro:IPR013128), Proteinase inhibitor I29, cathepsin propeptide (InterPro:IPR013201), Peptidase C1A, papain C-terminal (InterPro:IPR000668), Peptidase, cysteine peptidase active site (InterPro:IPR000169); BEST Arabidopsis thaliana protein match is: Cysteine proteinases superfamily protein (TAIR:AT3G49340.1); Has 7920 Blast hits to 7848 proteins in 742 species: Archae - 67; Bacteria - 274; Metazoa - 3329; Fungi - 4; Plants - 1897; Viruses - 138; Other Eukaryotes - 2211 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G27420-MONOMEReggNOG:COG4870eggNOG:KOG1543EMBL:AC006232EMBL:AY064033EMBL:AY096388EMBL:CP002685
EnsemblPlants:AT2G27420EnsemblPlants:AT2G27420.1entrez:817287GeneID:817287GO:GO:0008234Gramene:AT2G27420.1hmmpanther:PTHR12411
hmmpanther:PTHR12411:SF333HOGENOM:HOG000230773InterPro:IPR000169InterPro:IPR000668InterPro:IPR013128InterPro:IPR013201InterPro:IPR025660
InterPro:IPR025661KEGG:ath:AT2G27420MEROPS:I29.003OMA:GHESENRPANTHER:PTHR12411Pfam:PF00112Pfam:PF08246
PhylomeDB:Q9ZQH7PIR:F84672PRINTS:PR00705PROSITE:PS00139PROSITE:PS00639PROSITE:PS00640Proteomes:UP000006548
RefSeq:NP_565649.1scanprosite:PS00139scanprosite:PS00639scanprosite:PS00640SMART:SM00645SMART:SM00848SMR:Q9ZQH7
STRING:3702.AT2G27420.1SUPFAM:SSF54001TAIR:AT2G27420UniGene:At.27094UniProt:Q9ZQH7
Coordinates (TAIR10) chr2:-:11726311..11727519
Molecular Weight (calculated) 38740.50 Da
IEP (calculated) 5.11
GRAVY (calculated) -0.35
Length 348 amino acids
Sequence (TAIR10)
(BLAST)
001: MASTIIFILT IFLSYRTSLA TSRGSLFEAS AIEKHEQWMA RFNRVYSDET EKRNRFNIFK KNLEFVQNFN MNNKITYKVD INEFSDLTDE EFRATHTGLV
101: VPEAITRIST LSSGKNTVPF RYGNVSDNGE SMDWRQEGAV TPVKYQGRCG GCWAFSAVAA VEGITKITKG ELVSLSEQQL LDCDRDYNQG CRGGIMSKAF
201: EYIIKNQGIT TEDNYPYQES QQTCSSSTTL SSSFRAATIS GYETVPMNNE EALLQAVSQQ PVSVGIEGTG AAFRHYSGGV FNGECGTDLH HAVTIVGYGM
301: SEEGTKYWVV KNSWGETWGE NGYMRIKRDV DAPQGMCGLA ILAFYPLA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)