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AT2G27050.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : ETHYLENE-INSENSITIVE3-like 1
Curator
Summary (TAIR10)
ethylene-insensitive3-like1 (EIL1)
Computational
Description (TAIR10)
ETHYLENE-INSENSITIVE3-like 1 (EIL1); FUNCTIONS IN: transcription regulator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: ethylene mediated signaling pathway, response to ethylene stimulus, defense response to bacterium; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ethylene insensitive 3 (InterPro:IPR006957); BEST Arabidopsis thaliana protein match is: Ethylene insensitive 3 family protein (TAIR:AT3G20770.1); Has 336 Blast hits to 333 proteins in 48 species: Archae - 0; Bacteria - 2; Metazoa - 1; Fungi - 0; Plants - 332; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Protein Annotations
BioGrid:2599DIP:DIP-34866NeggNOG:ENOG410IFT4eggNOG:ENOG4110EBSEMBL:AC005623EMBL:AF004213EMBL:AY065191
EMBL:BT003344EMBL:CP002685EnsemblPlants:AT2G27050EnsemblPlants:AT2G27050.1entrez:817247Gene3D:1.10.3180.10GeneID:817247
Genevisible:Q9SLH0GO:GO:0003677GO:GO:0003700GO:GO:0005634GO:GO:0006351GO:GO:0009723GO:GO:0009873
GO:GO:0042742GO:GO:0071281Gramene:AT2G27050.1hmmpanther:PTHR33305hmmpanther:PTHR33305:SF1HOGENOM:HOG000240021InParanoid:Q9SLH0
IntAct:Q9SLH0InterPro:IPR023278KEGG:ath:AT2G27050KO:K14514ncoils:CoilOMA:GASKFHMPaxDb:Q9SLH0
Pfam:PF04873Pfam:Q9SLH0PhylomeDB:Q9SLH0PIR:B84668PRIDE:Q9SLH0PRO:PR:Q9SLH0ProteinModelPortal:Q9SLH0
Proteomes:UP000006548RefSeq:NP_180273.1SMR:Q9SLH0STRING:3702.AT2G27050.1SUPFAM:0050589SUPFAM:SSF116768TAIR:AT2G27050
tair10-symbols:AtEIL1tair10-symbols:EIL1UniGene:At.10809UniProt:Q9SLH0
Coordinates (TAIR10) chr2:+:11546314..11548068
Molecular Weight (calculated) 66499.20 Da
IEP (calculated) 6.06
GRAVY (calculated) -0.75
Length 584 amino acids
Sequence (TAIR10)
(BLAST)
001: MMMFNEMGMY GNMDFFSSST SLDVCPLPQA EQEPVVEDVD YTDDEMDVDE LEKRMWRDKM RLKRLKEQQS KCKEGVDGSK QRQSQEQARR KKMSRAQDGI
101: LKYMLKMMEV CKAQGFVYGI IPEKGKPVTG ASDNLREWWK DKVRFDRNGP AAIAKYQSEN NISGGSNDCN SLVGPTPHTL QELQDTTLGS LLSALMQHCD
201: PPQRRFPLEK GVSPPWWPNG NEEWWPQLGL PNEQGPPPYK KPHDLKKAWK VGVLTAVIKH MSPDIAKIRK LVRQSKCLQD KMTAKESATW LAIINQEEVV
301: ARELYPESCP PLSSSSSLGS GSLLINDCSE YDVEGFEKEQ HGFDVEERKP EIVMMHPLAS FGVAKMQHFP IKEEVATTVN LEFTRKRKQN NDMNVMVMDR
401: SAGYTCENGQ CPHSKMNLGF QDRSSRDNHQ MVCPYRDNRL AYGASKFHMG GMKLVVPQQP VQPIDLSGVG VPENGQKMIT ELMAMYDRNV QSNQTPPTLM
501: ENQSMVIDAK AAQNQQLNFN SGNQMFMQQG TNNGVNNRFQ MVFDSTPFDM AAFDYRDDWQ TGAMEGMGKQ QQQQQQQQDV SIWF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)