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AT2G26650.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : K+ transporter 1
Curator
Summary (TAIR10)
Encodes AKT1, a member of the Shaker family inward rectifying potassium channel predominantly expressed in predominantly in root hairs and root endodermis. This family includes five groups based on phylogenetic analysis (FEBS Letters (2007) 581: 2357): I (inward rectifying channel): AKT1 (AT2G26650), AKT5 (AT4G32500) and SPIK (also known as AKT6, AT2G25600); II (inward rectifying channel): KAT1 (AT5G46240) and KAT2 (AT4G18290); III (weakly inward rectifying channel): AKT2 (AT4G22200); IV (regulatory subunit involved in inwardly rectifying conductance formation): KAT3 (also known as AtKC1, AT4G32650); V (outward rectifying channel): SKOR (AT3G02850) and GORK (AT5G37500).
Computational
Description (TAIR10)
K+ transporter 1 (KT1); CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Potassium channel, voltage-dependent, EAG/ELK/ERG (InterPro:IPR003938), Protein of unknown function DUF3354 (InterPro:IPR021789), Ion transport (InterPro:IPR005821), Ankyrin repeat-containing domain (InterPro:IPR020683), Cyclic nucleotide-binding-like (InterPro:IPR018490), RmlC-like jelly roll fold (InterPro:IPR014710), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: K+ transporter 5 (TAIR:AT4G32500.1); Has 86170 Blast hits to 36402 proteins in 1811 species: Archae - 161; Bacteria - 9078; Metazoa - 42367; Fungi - 8163; Plants - 4219; Viruses - 1188; Other Eukaryotes - 20994 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G26550-MONOMERBioCyc:MetaCyc:MONOMER-14552BioGrid:2558DIP:DIP-36762N
eggNOG:ENOG410XPSEeggNOG:KOG0498EMBL:AC003105EMBL:AK227601
EMBL:BT006442EMBL:CP002685EMBL:U06745EMBL:X62907
EnsemblPlants:AT2G26650EnsemblPlants:AT2G26650.1entrez:817206ExpressionAtlas:Q38998
Gene3D:1.25.40.20Gene3D:2.60.120.10GeneID:817206Genevisible:Q38998
GO:GO:0005242GO:GO:0005886GO:GO:0006813GO:GO:0009414
GO:GO:0009651GO:GO:0010107GO:GO:0016021GO:GO:0042391
GO:GO:0042802GO:GO:0048767GO:GO:0090333Gramene:AT2G26650.1
hmmpanther:PTHR10217hmmpanther:PTHR10217:SF504HOGENOM:HOG000238230InParanoid:Q38998
IntAct:Q38998InterPro:IPR000595InterPro:IPR002110InterPro:IPR003938
InterPro:IPR005821InterPro:IPR014710InterPro:IPR018490InterPro:IPR020683
InterPro:IPR021789KEGG:ath:AT2G26650OMA:TGLYACIPaxDb:Q38998
Pfam:PF00027Pfam:PF00520Pfam:PF11834Pfam:PF12796
Pfam:Q38998Pfscan:PS50042Pfscan:PS50088Pfscan:PS50297
Pfscan:PS51490PhylomeDB:Q38998PIR:S23606PIR:S62694
PRIDE:Q38998PRINTS:PR01415PRINTS:PR01463PRO:PR:Q38998
PROSITE:PS50042PROSITE:PS50088PROSITE:PS50297PROSITE:PS51490
ProteinModelPortal:Q38998Proteomes:UP000006548Reactome:R-ATH-1296072RefSeq:NP_180233.1
SMART:SM00100SMART:SM00248SMR:Q38998STRING:3702.AT2G26650.1
SUPFAM:SSF48403SUPFAM:SSF51206SUPFAM:SSF81324TAIR:AT2G26650
tair10-symbols:AKT1tair10-symbols:ATAKT1tair10-symbols:KT1TCDB:1.A.1.4.1
TMHMM:TMhelixUniGene:At.48521UniGene:At.68413UniProt:B9DI19
UniProt:Q38998
Coordinates (TAIR10) chr2:-:11331965..11336444
Molecular Weight (calculated) 96995.30 Da
IEP (calculated) 7.33
GRAVY (calculated) -0.10
Length 857 amino acids
Sequence (TAIR10)
(BLAST)
001: MRGGALLCGQ VQDEIEQLSR ESSHFSLSTG ILPSLGARSN RRVKLRRFVV SPYDHKYRIW EAFLVVLVVY TAWVSPFEFG FLRKPRPPLS ITDNIVNAFF
101: AIDIIMTFFV GYLDKSTYLI VDDRKQIAFK YLRSWFLLDL VSTIPSEAAM RISSQSYGLF NMLRLWRLRR VGALFARLEK DRNFNYFWVR CAKLVCVTLF
201: AVHCAACFYY LIAARNSNPA KTWIGANVAN FLEESLWMRY VTSMYWSITT LTTVGYGDLH PVNTKEMIFD IFYMLFNLGL TAYLIGNMTN LVVHGTSRTR
301: NFRDTIQAAS NFAHRNHLPP RLQDQMLAHL CLKYRTDSEG LQQQETLDAL PKAIRSSISH FLFYSLMDKV YLFRGVSNDL LFQLVSEMKA EYFPPKEDVI
401: LQNEAPTDFY ILVNGTADLV DVDTGTESIV REVKAGDIIG EIGVLCYRPQ LFTVRTKRLC QLLRMNRTTF LNIIQANVGD GTIIMNNLLQ HLKEMNDPVM
501: TNVLLEIENM LARGKMDLPL NLCFAAIRED DLLLHQLLKR GLDPNESDNN GRTPLHIAAS KGTLNCVLLL LEYHADPNCR DAEGSVPLWE AMVEGHEKVV
601: KVLLEHGSTI DAGDVGHFAC TAAEQGNLKL LKEIVLHGGD VTRPRATGTS ALHTAVCEEN IEMVKYLLEQ GADVNKQDMH GWTPRDLAEQ QGHEDIKALF
701: REKLHERRVH IETSSSVPIL KTGIRFLGRF TSEPNIRPAS REVSFRIRET RARRKTNNFD NSLFGILANQ SVPKNGLATV DEGRTGNPVR VTISCAEKDD
801: IAGKLVLLPG SFKELLELGS NKFGIVATKV MNKDNNAEID DVDVIRDGDH LIFATDS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)