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AT2G26640.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.999
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : 3-ketoacyl-CoA synthase 11
Curator
Summary (TAIR10)
Encodes KCS11, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).
Computational
Description (TAIR10)
3-ketoacyl-CoA synthase 11 (KCS11); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity; INVOLVED IN: response to cold, response to light stimulus, response to osmotic stress; LOCATED IN: membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Very-long-chain 3-ketoacyl-CoA synthase (InterPro:IPR012392), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal (InterPro:IPR013747), FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-CoA synthase 2 (TAIR:AT1G04220.1); Has 3664 Blast hits to 3650 proteins in 908 species: Archae - 0; Bacteria - 1588; Metazoa - 0; Fungi - 2; Plants - 1914; Viruses - 0; Other Eukaryotes - 160 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G26640-MONOMERBioGrid:2557EC:2.3.1.199eggNOG:ENOG410IHMW
eggNOG:ENOG410Y5VHEMBL:AC003105EMBL:BT003854EMBL:BT005692
EMBL:CP002685EnsemblPlants:AT2G26640EnsemblPlants:AT2G26640.1entrez:817205
Gene3D:3.40.47.10GeneID:817205Genevisible:O48780GO:GO:0006633
GO:GO:0009409GO:GO:0009416GO:GO:0016021GO:GO:0016747
Gramene:AT2G26640.1gramene_pathway:2.3.1.-gramene_pathway:PWY-5080hmmpanther:PTHR31561
hmmpanther:PTHR31561:SF3HOGENOM:HOG000238893InParanoid:O48780IntAct:O48780
InterPro:IPR012392InterPro:IPR013601InterPro:IPR013747InterPro:IPR016039
KEGG:00061+2.3.1.180KEGG:00062+2.3.1.199KEGG:ath:AT2G26640KO:K15397
OMA:AMVISMEPANTHER:PTHR31561PaxDb:O48780Pfam:O48780
Pfam:PF08392Pfam:PF08541PhylomeDB:O48780PIR:A84663
PIRSF:PIRSF036417PRIDE:O48780PRO:PR:O48780ProteinModelPortal:O48780
Proteomes:UP000006548RefSeq:NP_180232.1SMR:O48780STRING:3702.AT2G26640.1
SUPFAM:SSF53901TAIR:AT2G26640tair10-symbols:KCS11TMHMM:TMhelix
UniGene:At.48521UniGene:At.68413UniPathway:UPA00094UniProt:O48780
Coordinates (TAIR10) chr2:+:11330094..11331623
Molecular Weight (calculated) 57817.80 Da
IEP (calculated) 9.55
GRAVY (calculated) -0.10
Length 509 amino acids
Sequence (TAIR10)
(BLAST)
001: MDVEQKKPLI ESSDRNLPDF KKSVKLKYVK LGYHYLITHG MYLFLSPLVL VIAAQISTFS VTDLRSLWEH LQYNLISVVV CSMLLVFLMT IYFMTRPRPV
101: YLVNFSCFKP DESRKCTKKI FMDRSKLTGS FTEENLEFQR KILQRSGLGE STYLPEAVLN VPPNPCMKEA RKEAETVMFG AIDELLAKTN VNPKDIGILI
201: VNCSLFNPTP SLSAMVVNHY KLRGNILSYN LGGMGCSAGL ISIDLAKHLL HSIPNTYAMV ISMENITLNW YFGNDRSKLV SNCLFRMGGA AILLSNKRWD
301: RRRSKYELVD TVRTHKGADD KCFGCITQEE DSASKIGVTL SKELMAVAGD ALKTNITTLG PLVLPTSEQL LFFATLVGRK LFKMKIKPYI PDFKLAFEHF
401: CIHAGGRAVL DELEKNLKLT EWHMEPSRMT LYRFGNTSSS SLWYELAYSE AKGRIKKGDR IWQIAFGSGF KCNSSVWRAV RSVNPKKEKN PWMDEIHEFP
501: VEVPKVSTI
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)