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AT2G26450.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
extracellular 1.000
ASURE: extracellular
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Plant invertase/pectin methylesterase inhibitor superfamily
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT4G33230.1); Has 3076 Blast hits to 3004 proteins in 379 species: Archae - 6; Bacteria - 701; Metazoa - 5; Fungi - 205; Plants - 2131; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G26450-MONOMEREC:3.1.1.11eggNOG:COG4677eggNOG:ENOG410IN0HEMBL:AC002505EMBL:AK229600EMBL:BT008681
EMBL:CP002685EnsemblPlants:AT2G26450EnsemblPlants:AT2G26450.1entrez:817185Gene3D:1.20.140.40Gene3D:2.160.20.10GeneID:817185
Genevisible:Q7Y201GO:GO:0004857GO:GO:0005618GO:GO:0016021GO:GO:0030599GO:GO:0042545GO:GO:0045330
GO:GO:0045490Gramene:AT2G26450.1gramene_pathway:3.1.1.11gramene_pathway:PWY-1081hmmpanther:PTHR31707hmmpanther:PTHR31707:SF3HOGENOM:HOG000217409
InParanoid:Q7Y201InterPro:IPR000070InterPro:IPR006501InterPro:IPR011050InterPro:IPR012334InterPro:IPR033131KEGG:00040+3.1.1.11
KEGG:00500+3.1.1.11KEGG:ath:AT2G26450ncoils:CoilOMA:CKLLVEDPaxDb:Q7Y201Pfam:PF01095Pfam:PF04043
Pfam:Q7Y201PIR:T00978PRIDE:Q7Y201PRO:PR:Q7Y201PROSITE:PS00503ProteinModelPortal:Q7Y201Proteomes:UP000006548
RefSeq:NP_850077.1scanprosite:PS00503SMART:SM00856SMR:Q7Y201SUPFAM:SSF101148SUPFAM:SSF51126TAIR:AT2G26450
TIGRfam:TIGR01614TIGRFAMs:TIGR01614TMHMM:TMhelixUniGene:At.38894UniGene:At.70844UniPathway:UPA00545UniProt:Q7Y201
Coordinates (TAIR10) chr2:+:11251279..11253446
Molecular Weight (calculated) 68604.50 Da
IEP (calculated) 8.61
GRAVY (calculated) -0.43
Length 614 amino acids
Sequence (TAIR10)
(BLAST)
001: MAFQDFDKIQ ERVNANRKRK FRKRIIVGTV SLLVVVAAIV GGAFAYVAYE KRNEQQQQQQ QAKNHNKSGS GNNVVKDSDK KSPSPPTPSQ KAPVSAAQSV
101: KPGQGDKIIQ TLCSSTLYMQ ICEKTLKNRT DKGFALDNPT TFLKSAIEAV NEDLDLVLEK VLSLKTENQD DKDAIEQCKL LVEDAKEETV ASLNKINVTE
201: VNSFEKVVPD LESWLSAVMS YQETCLDGFE EGNLKSEVKT SVNSSQVLTS NSLALIKTFT ENLSPVMKVV ERHLLDDIPS WVSNDDRRML RAVDVKALKP
301: NATVAKDGSG DFTTINDALR AMPEKYEGRY IIYVKQGIYD EYVTVDKKKA NLTMVGDGSQ KTIVTGNKSH AKKIRTFLTA TFVAQGEGFM AQSMGFRNTA
401: GPEGHQAVAI RVQSDRSIFL NCRFEGYQDT LYAYTHRQYY RSCVIVGTID FIFGDAAAIF QNCNIFIRKG LPGQKNTVTA QGRVDKFQTT GFVVHNCKIA
501: ANEDLKPVKE EYKSYLGRPW KNYSRTIIME SKIENVIDPV GWLRWQETDF AIDTLYYAEY NNKGSSGDTT SRVKWPGFKV INKEEALNYT VGPFLQGDWI
601: SASGSPVKLG LYDA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)