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AT2G26080.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : glycine decarboxylase P-protein 2
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
glycine decarboxylase P-protein 2 (GLDP2); FUNCTIONS IN: glycine dehydrogenase (decarboxylating) activity, ATP binding; INVOLVED IN: oxidation reduction, glycine decarboxylation via glycine cleavage system, glycine metabolic process; LOCATED IN: mitochondrion, glycine cleavage complex, chloroplast, chloroplast envelope; EXPRESSED IN: 33 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Glycine cleavage system P-protein-like (InterPro:IPR020581), Glycine cleavage system P-protein (InterPro:IPR003437), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Glycine cleavage system P-protein, N-terminal (InterPro:IPR020580); BEST Arabidopsis thaliana protein match is: glycine decarboxylase P-protein 1 (TAIR:AT4G33010.1); Has 12461 Blast hits to 11458 proteins in 1938 species: Archae - 256; Bacteria - 5279; Metazoa - 139; Fungi - 214; Plants - 99; Viruses - 0; Other Eukaryotes - 6474 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G26080-MONOMERBioGrid:2501EC:1.4.4.2eggNOG:COG0403eggNOG:COG1003eggNOG:KOG2040EMBL:AC004747
EMBL:AK226865EMBL:CP002685EnsemblPlants:AT2G26080EnsemblPlants:AT2G26080.1entrez:817149Gene3D:3.40.640.10GeneID:817149
Genevisible:O80988GO:GO:0004375GO:GO:0005524GO:GO:0005739GO:GO:0005960GO:GO:0009507GO:GO:0009941
GO:GO:0016594GO:GO:0019464GO:GO:0048046Gramene:AT2G26080.1gramene_pathway:1.4.4.2gramene_pathway:GLYCLEAV-PWYHAMAP:MF_00711
hmmpanther:PTHR11773hmmpanther:PTHR11773:SF4HOGENOM:HOG000239369InParanoid:O80988InterPro:IPR003437InterPro:IPR015421InterPro:IPR015424
InterPro:IPR020580InterPro:IPR020581KEGG:ath:AT2G26080KO:K00281ncoils:CoilOMA:QPANEEQPANTHER:PTHR11773
PaxDb:O80988Pfam:O80988Pfam:PF02347PhylomeDB:O80988PIR:T02615PRIDE:O80988PRO:PR:O80988
ProteinModelPortal:O80988Proteomes:UP000006548Reactome:R-ATH-6783984RefSeq:NP_180178.1SMR:O80988STRING:3702.AT2G26080.1SUPFAM:SSF53383
SwissPalm:O80988TAIR:AT2G26080tair10-symbols:AtGLDP2tair10-symbols:GLDP2TIGRfam:TIGR00461TIGRFAMs:TIGR00461UniGene:At.24550
UniGene:At.72082UniProt:O80988
Coordinates (TAIR10) chr2:-:11109330..11113786
Molecular Weight (calculated) 113782.00 Da
IEP (calculated) 6.63
GRAVY (calculated) -0.18
Length 1044 amino acids
Sequence (TAIR10)
(BLAST)
0001: MERARRLAYR GIVKRLVNET KRHRNGESSL LPTTTVTPSR YVSSVSSFLH RRRDVSGSAF TTSGRNQHQT RSISVDALKP SDTFPRRHNS ATPDEQAQMA
0101: NYCGFDNLNT LIDSTVPKSI RLDSMKFSGI FDEGLTESQM IEHMSDLASK NKVFKSFIGM GYYNTHVPPV ILRNIMENPA WYTQYTPYQA EISQGRLESL
0201: LNYQTVITDL TGLPMSNASL LDEGTAAAEA MAMCNNILKG KKKTFVIASN CHPQTIDVCK TRADGFDLKV VTVDIKDVDY SSGDVCGVLV QYPGTEGEVL
0301: DYGEFVKNAH ANGVKVVMAT DLLALTMLKP PGEFGADIVV GSGQRFGVPM GYGGPHAAFL ATSQEYKRMM PGRIIGVSVD SSGKQALRMA MQTREQHIRR
0401: DKATSNICTA QALLANMTAM YAVYHGPEGL KSIAQRVHGL AGVFALGLKK LGTAQVQDLP FFDTVKVTCS DATAIFDVAA KKEINLRLVD SNTITVAFDE
0501: TTTLDDVDKL FEVFASGKPV QFTAESLAPE FNNAIPSSLT RESPYLTHPI FNMYHTEHEL LRYIHKLQNK DLSLCHSMIP LGSCTMKLNA TTEMMPVTWP
0601: SFTNMHPFAP VEQAQGYQEM FTNLGELLCT ITGFDSFSLQ PNAGAAGEYA GLMVIRAYHM SRGDHHRNVC IIPVSAHGTN PASAAMCGMK IVAVGTDAKG
0701: NINIEELRNA AEANKDNLAA LMVTYPSTHG VYEEGIDEIC NIIHENGGQV YMDGANMNAQ VGLTSPGFIG ADVCHLNLHK TFCIPHGGGG PGMGPIGVKQ
0801: HLAPFLPSHP VIPTGGIPEP EQTSPLGTIS AAPWGSALIL PISYTYIAMM GSGGLTDASK IAILNANYMA KRLESHYPVL FRGVNGTVAH EFIIDLRGFK
0901: NTAGIEPEDV AKRLMDYGFH GPTMSWPVPG TLMIEPTESE SKAELDRFCD ALISIREEIS QIEKGNADPN NNVLKGAPHP PSLLMADTWK KPYSREYAAF
1001: PAPWLRSSKF WPTTGRVDNV YGDRNLVCTL QPANEEQAAA AVSA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)